COE2_BOVIN
ID COE2_BOVIN Reviewed; 575 AA.
AC Q08DL5;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 31-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=Transcription factor COE2;
DE AltName: Full=Early B-cell factor 2;
DE Short=EBF-2;
GN Name=EBF2; Synonyms=COE2;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Hereford; TISSUE=Fetal muscle;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription factor that, in osteoblasts, activates the
CC decoy receptor for RANKL, TNFRSF11B, which in turn regulates osteoclast
CC differentiation. Acts in synergy with the Wnt-responsive LEF1/CTNNB1
CC pathway. Recognizes variations of the palindromic sequence 5'-
CC ATTCCCNNGGGAATT-3' (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Forms either a homodimer or a heterodimer with a related
CC family member (By similarity). Interacts with SIX1 (By similarity).
CC {ECO:0000250|UniProtKB:O08792}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the COE family. {ECO:0000305}.
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DR EMBL; BC123680; AAI23681.1; -; mRNA.
DR RefSeq; NP_001071407.1; NM_001077939.1.
DR AlphaFoldDB; Q08DL5; -.
DR SMR; Q08DL5; -.
DR STRING; 9913.ENSBTAP00000014368; -.
DR PaxDb; Q08DL5; -.
DR Ensembl; ENSBTAT00000086147; ENSBTAP00000073790; ENSBTAG00000040390.
DR GeneID; 519342; -.
DR KEGG; bta:519342; -.
DR CTD; 64641; -.
DR VEuPathDB; HostDB:ENSBTAG00000040390; -.
DR VGNC; VGNC:106720; EBF2.
DR eggNOG; KOG3836; Eukaryota.
DR GeneTree; ENSGT00950000182859; -.
DR InParanoid; Q08DL5; -.
DR OMA; YGTSGGM; -.
DR OrthoDB; 817293at2759; -.
DR Proteomes; UP000009136; Chromosome 8.
DR Bgee; ENSBTAG00000040390; Expressed in intramuscular adipose tissue and 61 other tissues.
DR ExpressionAtlas; Q08DL5; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd11606; COE_DBD; 1.
DR CDD; cd01175; IPT_COE; 1.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.60.40.3180; -; 1.
DR InterPro; IPR032200; COE_DBD.
DR InterPro; IPR038173; COE_DBD_sf.
DR InterPro; IPR032201; COE_HLH.
DR InterPro; IPR038006; COE_IPT.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR002909; IPT_dom.
DR InterPro; IPR003523; Transcription_factor_COE.
DR InterPro; IPR018350; Transcription_factor_COE_CS.
DR PANTHER; PTHR10747; PTHR10747; 1.
DR Pfam; PF16422; COE1_DBD; 1.
DR Pfam; PF16423; COE1_HLH; 1.
DR Pfam; PF01833; TIG; 1.
DR SMART; SM00429; IPT; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
DR PROSITE; PS01345; COE; 1.
PE 2: Evidence at transcript level;
KW Activator; Developmental protein; DNA-binding; Metal-binding; Nucleus;
KW Reference proteome; Transcription; Transcription regulation; Zinc;
KW Zinc-finger.
FT CHAIN 1..575
FT /note="Transcription factor COE2"
FT /id="PRO_0000282439"
FT DOMAIN 253..336
FT /note="IPT/TIG"
FT ZN_FING 150..169
FT /note="C5-type"
FT /evidence="ECO:0000255"
FT REGION 62..65
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT REGION 196..203
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT REGION 235..238
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT REGION 441..479
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT SITE 162
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT SITE 171
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
SQ SEQUENCE 575 AA; 62620 MW; B1F8CB3529137449 CRC64;
MFGIQDTLGR GPALKEKSLG AEMDSVRSWV RNVGVVDANV AAQSGVALSR AHFEKQPPSN
LRKSNFFHFV LALYDRQGQP VEIERTAFVD FVENDKEQGN EKTNNGTHYK LQLLYSNGVR
TEQDLYVRLI DSVTKQPIAY EGQNKNPEMC RVLLTHEVMC SRCCEKKSCG NRNETPSDPV
IIDRFFLKFF LKCNQNCLKT AGNPRDMRRF QVVLSTTVNV DGHVLAVSDN MFVHNNSKHG
RRARRLDPSE ATPCIKAISP SEGWTTGGAM VIIIGDNFFD GLQVVFGTML VWSELITPHA
IRVQTPPRHI PGVVEVTLSY KSKQFCKGAP GRFIYTALNE PTIDYGFQRL QKVIPRHPGD
PERLAKEMLL KRAADLVEAL YGTPHNNQDI ILKRAADIAE ALYSVPRNPS QIPALSSSPA
HSGMMGINSY GSQLGVSISE STQGNNQGYI RNTSSISPRG YSSSSTPQQS NYSTSSNSMN
GYSNVPMANL GVPGSPGFLN GSPTGSPYGI MSSSPTVGSS STSSILPFSS SVFPAVKQKS
AFAPVIRPQG SPSPACSSGN GNGFRAMTGL VVPPM