COE2_XENTR
ID COE2_XENTR Reviewed; 575 AA.
AC Q6P4K7;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Transcription factor coe2 {ECO:0000312|EMBL:AAH63360.1};
DE AltName: Full=Early B-cell factor 2 {ECO:0000250|UniProtKB:B7ZRJ4};
DE Short=EBF-2 {ECO:0000250|UniProtKB:B7ZRJ4};
GN Name=ebf2 {ECO:0000312|Xenbase:XB-GENE-971136};
GN Synonyms=coe2 {ECO:0000312|EMBL:AAH63360.1};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1] {ECO:0000312|EMBL:AAH63360.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Neurula {ECO:0000312|EMBL:AAH63360.1};
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May play a pivotal role in the transcriptional cascade that
CC specifies primary neurons in embryos. Stabilizes the higher neural
CC potential of selected progenitor cells that express neurog2/X-ngnr-1 by
CC maintaining Delta-Notch signaling. Thus ensures the transition between
CC neural competence and irreversible commitment to a neural fate. Also
CC promotes neuronal differentiation by activating neurod1 expression,
CC directly or indirectly (By similarity). {ECO:0000250|UniProtKB:B7ZRI2}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255}.
CC -!- SIMILARITY: Belongs to the COE family. {ECO:0000255}.
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DR EMBL; BC063360; AAH63360.1; -; mRNA.
DR RefSeq; NP_989200.1; NM_203869.1.
DR AlphaFoldDB; Q6P4K7; -.
DR SMR; Q6P4K7; -.
DR STRING; 8364.ENSXETP00000022402; -.
DR PaxDb; Q6P4K7; -.
DR DNASU; 394808; -.
DR GeneID; 394808; -.
DR KEGG; xtr:394808; -.
DR CTD; 64641; -.
DR Xenbase; XB-GENE-971136; ebf2.
DR eggNOG; KOG3836; Eukaryota.
DR HOGENOM; CLU_016320_3_1_1; -.
DR InParanoid; Q6P4K7; -.
DR OrthoDB; 817293at2759; -.
DR Proteomes; UP000008143; Chromosome 3.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd11606; COE_DBD; 1.
DR CDD; cd01175; IPT_COE; 1.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 2.60.40.3180; -; 1.
DR InterPro; IPR032200; COE_DBD.
DR InterPro; IPR038173; COE_DBD_sf.
DR InterPro; IPR032201; COE_HLH.
DR InterPro; IPR038006; COE_IPT.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR002909; IPT_dom.
DR InterPro; IPR003523; Transcription_factor_COE.
DR InterPro; IPR018350; Transcription_factor_COE_CS.
DR PANTHER; PTHR10747; PTHR10747; 1.
DR Pfam; PF16422; COE1_DBD; 1.
DR Pfam; PF16423; COE1_HLH; 1.
DR Pfam; PF01833; TIG; 1.
DR SMART; SM00429; IPT; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
DR PROSITE; PS01345; COE; 1.
PE 2: Evidence at transcript level;
KW Activator; Developmental protein; Differentiation; DNA-binding;
KW Metal-binding; Neurogenesis; Nucleus; Reference proteome; Transcription;
KW Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..575
FT /note="Transcription factor coe2"
FT /id="PRO_0000401105"
FT DOMAIN 254..336
FT /note="IPT/TIG"
FT /evidence="ECO:0000255"
FT ZN_FING 151..170
FT /note="C5-type"
FT /evidence="ECO:0000255"
FT REGION 63..66
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT REGION 197..204
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT REGION 236..239
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT REGION 450..487
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT SITE 163
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
FT SITE 172
FT /note="Interaction with DNA"
FT /evidence="ECO:0000250"
SQ SEQUENCE 575 AA; 62805 MW; 859BE843378314BE CRC64;
MFGVQDTLAR SGTALRDKAL GVGMDPVRSW VRNVGVVDAK VAAQSGVAVS RAHFEKQPPS
NLRKSNFFHF VLALYDRQGQ PIEIERTAFV DFVENEKELS TEKTNNGTHY KLQLLYSNGV
RTEQDLYVRL IDSVTKQPIA YEGQNKNPEM CRVLLTHEVM CSRCCEKKSC GNRNETPSDP
VIIDRFFLKF FLKCNQNCLK TAGNPRDMRR FQVVLSTTVN VDGHVLAVSD NMFVHNNSKH
GRRARRLDPS EATPCIKAIS PSEGWTTGGA MVIIIGDNFF DGLQVVFGTM LVWSELITPH
AIRVQTPPRH IPGVVEVTLS YKSKQFCKGA PGRFIYTALN EPTIDYGFQR LQKVIPRHPG
DPERLAKEML LKRAADLVEA LYGTPHNNQD IILKRAADIA EALYSVPRNH NQIPALSSSP
VHSGMMGINS YGGQLGVSIS ESQANNQGYI RNTSSISPRG YSSSSTPQQS NYSTPSNSMN
GYSNVPMSNL GVPGSPGFIN GSPTTSPYGI MPSSPPVGSS GSSSILPFSS SVFPSIKQKS
AFAPVIRPQG SPSPACSSSN SNGFRAMTGL VVPPM