COL10_CAEEL
ID COL10_CAEEL Reviewed; 294 AA.
AC Q17460;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 133.
DE RecName: Full=Cuticle collagen 10;
DE Flags: Precursor;
GN Name=col-10; ORFNames=B0222.8;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP IDENTIFICATION.
RX PubMed=2983191; DOI=10.1128/mcb.5.2.363-372.1985;
RA Cox G.N., Hirsh D.;
RT "Stage-specific patterns of collagen gene expression during development of
RT Caenorhabditis elegans.";
RL Mol. Cell. Biol. 5:363-372(1985).
RN [3]
RP TISSUE SPECIFICITY, AND DEVELOPMENTAL STAGE.
RX PubMed=9875852; DOI=10.1016/s0092-8674(00)81722-5;
RA Lu X., Horvitz H.R.;
RT "lin-35 and lin-53, two genes that antagonize a C. elegans Ras pathway,
RT encode proteins similar to Rb and its binding protein RbAp48.";
RL Cell 95:981-991(1998).
CC -!- FUNCTION: Nematode cuticles are composed largely of collagen-like
CC proteins. The cuticle functions both as an exoskeleton and as a barrier
CC to protect the worm from its environment (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC by disulfide bonds and other types of covalent cross-links.
CC {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in hypodermal cells.
CC {ECO:0000269|PubMed:9875852}.
CC -!- DEVELOPMENTAL STAGE: Expressed during larval development.
CC {ECO:0000269|PubMed:9875852}.
CC -!- SIMILARITY: Belongs to the cuticular collagen family. {ECO:0000305}.
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DR EMBL; FO080127; CCD61421.1; -; Genomic_DNA.
DR PIR; T29839; T29839.
DR RefSeq; NP_505376.1; NM_072975.4.
DR AlphaFoldDB; Q17460; -.
DR SMR; Q17460; -.
DR BioGRID; 44336; 2.
DR DIP; DIP-25271N; -.
DR IntAct; Q17460; 2.
DR STRING; 6239.B0222.8; -.
DR PaxDb; Q17460; -.
DR EnsemblMetazoa; B0222.8.1; B0222.8.1; WBGene00000599.
DR UCSC; B0222.8; c. elegans.
DR WormBase; B0222.8; CE06699; WBGene00000599; col-10.
DR eggNOG; KOG3544; Eukaryota.
DR GeneTree; ENSGT00970000195960; -.
DR HOGENOM; CLU_001074_4_3_1; -.
DR InParanoid; Q17460; -.
DR OMA; TCPPRDT; -.
DR OrthoDB; 1595166at2759; -.
DR PhylomeDB; Q17460; -.
DR SignaLink; Q17460; -.
DR PRO; PR:Q17460; -.
DR Proteomes; UP000001940; Chromosome V.
DR Bgee; WBGene00000599; Expressed in larva and 3 other tissues.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:UniProtKB-KW.
DR GO; GO:0002164; P:larval development; NAS:UniProtKB.
DR InterPro; IPR002486; Col_cuticle_N.
DR Pfam; PF01484; Col_cuticle_N; 1.
DR SMART; SM01088; Col_cuticle_N; 1.
PE 2: Evidence at transcript level;
KW Collagen; Cuticle; Disulfide bond; Reference proteome; Repeat; Signal.
FT SIGNAL 1..30
FT /evidence="ECO:0000255"
FT CHAIN 31..294
FT /note="Cuticle collagen 10"
FT /id="PRO_0000307866"
FT REGION 100..133
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 102..127
FT /note="Triple-helical region"
FT REGION 149..278
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 153..274
FT /note="Triple-helical region"
FT COMPBIAS 100..119
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 153..167
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 294 AA; 28469 MW; A7C70A6A3DA8BA0E CRC64;
MEKFLVTLST GAASIAVLAV LFTVPSLYNT INEVHDEVLD GVSVFRVETD SAWTEMMDIQ
ITVTPPTKPR VNPFNSIFRQ KRQTFSGLPA WCQCEPTKPT CPPGPPGPPG QPGAPGTPGA
PGPKGDDNTA TFAPLTCAPV SQDCVKCPEG PAGPAGPEGP AGPAGPDGQP GAPGNAGNPG
SDGQPGAPGD NGQDGAPGQD GQPGAPGQDG QRGSGAPGGP GAPGNAGPAG PAGQDGAPGQ
DGQPGPAGPA GQDGAPGNAG SDGQPGAPGG PGLPGNDAAY CACPPRSAVF VSRH