COL10_CHICK
ID COL10_CHICK Reviewed; 277 AA.
AC Q2LK95;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 21-FEB-2006, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Collectin-10;
DE AltName: Full=Collectin-1;
DE Short=CL-1;
DE Short=cCL-1;
DE Flags: Precursor;
GN Name=COLEC10; Synonyms=CL1;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RX PubMed=16289291; DOI=10.1016/j.molimm.2005.09.015;
RA Hogenkamp A., van Eijk M., van Dijk A., van Asten A.J.A.M.,
RA Veldhuizen E.J.A., Haagsman H.P.;
RT "Characterization and expression sites of newly identified chicken
RT collectins.";
RL Mol. Immunol. 43:1604-1616(2006).
CC -!- FUNCTION: Lectin that binds to various sugars: galactose > mannose =
CC fucose > N-acetylglucosamine > N-acetylgalactosamine. Acts as a
CC chemoattractant, probably involved in the regulation of cell migration.
CC {ECO:0000250|UniProtKB:Q9Y6Z7}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250|UniProtKB:Q9Y6Z7}. Golgi
CC apparatus {ECO:0000250|UniProtKB:Q8CF98}. Cytoplasm
CC {ECO:0000250|UniProtKB:Q9Y6Z7}.
CC -!- TISSUE SPECIFICITY: Widely expressed. Highly expressed in lung. Weakly
CC expressed in larynx, syrinx and cranial air sac. Expressed throughout
CC the lower gastrointestinal tract in increasing levels starting from a
CC faint signal in duodenum and ending with relatively high signals in
CC proctodeum, coprodeum and urodeum. In the upper part of the
CC gastrointestinal tract, expressed in tongue, crop, and mucosa of the
CC crop. {ECO:0000269|PubMed:16289291}.
CC -!- SIMILARITY: Belongs to the COLEC10/COLEC11 family. {ECO:0000305}.
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DR EMBL; DQ129668; AAZ29617.1; -; mRNA.
DR RefSeq; NP_001034687.1; NM_001039598.1.
DR AlphaFoldDB; Q2LK95; -.
DR SMR; Q2LK95; -.
DR STRING; 9031.ENSGALP00000043336; -.
DR PaxDb; Q2LK95; -.
DR Ensembl; ENSGALT00000069448; ENSGALP00000056221; ENSGALG00000033144.
DR Ensembl; ENSGALT00000091970; ENSGALP00000069662; ENSGALG00000033144.
DR GeneID; 420281; -.
DR KEGG; gga:420281; -.
DR CTD; 10584; -.
DR VEuPathDB; HostDB:geneid_420281; -.
DR eggNOG; KOG4297; Eukaryota.
DR GeneTree; ENSGT00940000159374; -.
DR HOGENOM; CLU_049894_3_2_1; -.
DR InParanoid; Q2LK95; -.
DR OMA; VCATHAI; -.
DR OrthoDB; 1105722at2759; -.
DR PhylomeDB; Q2LK95; -.
DR Reactome; R-GGA-166662; Lectin pathway of complement activation.
DR Reactome; R-GGA-166663; Initial triggering of complement.
DR PRO; PR:Q2LK95; -.
DR Proteomes; UP000000539; Chromosome 2.
DR Bgee; ENSGALG00000033144; Expressed in liver and 11 other tissues.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
DR GO; GO:0005537; F:mannose binding; IEA:UniProtKB-KW.
DR CDD; cd03591; CLECT_collectin_like; 1.
DR Gene3D; 3.10.100.10; -; 1.
DR InterPro; IPR001304; C-type_lectin-like.
DR InterPro; IPR016186; C-type_lectin-like/link_sf.
DR InterPro; IPR018378; C-type_lectin_CS.
DR InterPro; IPR008160; Collagen.
DR InterPro; IPR033990; Collectin_CTLD.
DR InterPro; IPR016187; CTDL_fold.
DR Pfam; PF01391; Collagen; 2.
DR Pfam; PF00059; Lectin_C; 1.
DR SMART; SM00034; CLECT; 1.
DR SUPFAM; SSF56436; SSF56436; 1.
DR PROSITE; PS00615; C_TYPE_LECTIN_1; 1.
DR PROSITE; PS50041; C_TYPE_LECTIN_2; 1.
PE 2: Evidence at transcript level;
KW Calcium; Collagen; Cytoplasm; Disulfide bond; Glycoprotein;
KW Golgi apparatus; Lectin; Mannose-binding; Reference proteome; Secreted;
KW Signal.
FT SIGNAL 1..27
FT /evidence="ECO:0000255"
FT CHAIN 28..277
FT /note="Collectin-10"
FT /id="PRO_5000140434"
FT DOMAIN 56..115
FT /note="Collagen-like"
FT DOMAIN 155..271
FT /note="C-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
FT REGION 41..82
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 48..64
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 258
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 176..270
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
FT DISULFID 248..262
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00040"
SQ SEQUENCE 277 AA; 30436 MW; B51F080A14003CA8 CRC64;
MSRKKEQQLR KYGTLVVLFI FQVQIFGFDV DNRPTTDVCS THTILPGPKG DDGEKGDRGE
VGKQGKVGPK GPKGNKGTVG DVGDQGMLGK IGPIGGKGDK GAKGISGVSG KKGKAGTVCD
CGRYRRVVGQ LNINVARLNT SIKFVKNVIA GIRETDEKFY YIVKEEKNYR EALMHCRDRG
GTLAMPKDEV TNALLADYIS SSGLFRAFIG LNDMEKEGQF VYADSSPLQN YSNWKDGEPH
DSTGHEDCVE MLSTGEWNDS ECQVTIYFIC EFLKKRK