COL2_CAEEL
ID COL2_CAEEL Reviewed; 301 AA.
AC P17656;
DT 01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1990, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=Cuticle collagen 2;
DE Flags: Precursor;
GN Name=col-2; ORFNames=W01B6.7;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=7139711; DOI=10.1016/0092-8674(82)90256-2;
RA Kramer J.M., Cox G.N., Hirsh D.;
RT "Comparisons of the complete sequences of two collagen genes from
RT Caenorhabditis elegans.";
RL Cell 30:599-606(1982).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], TISSUE SPECIFICITY, AND DEVELOPMENTAL
RP STAGE.
RC STRAIN=Bristol N2;
RX PubMed=2578467; DOI=10.1016/s0021-9258(18)89683-1;
RA Kramer J.M., Cox G.N., Hirsh D.;
RT "Expression of the Caenorhabditis elegans collagen genes col-1 and col-2 is
RT developmentally regulated.";
RL J. Biol. Chem. 260:1945-1951(1985).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Bristol N2;
RA Kohara Y., Shin-i T., Suzuki Y., Sugano S., Thierry-Mieg D.,
RA Thierry-Mieg J.;
RT "The Caenorhabditis elegans transcriptome project, a complementary view of
RT the genome.";
RL Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Nematode cuticles are composed largely of collagen-like
CC proteins. The cuticle functions both as an exoskeleton and as a barrier
CC to protect the worm from its environment.
CC -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC by disulfide bonds and other types of covalent cross-links.
CC -!- TISSUE SPECIFICITY: Syncytial dorsal and ventral epidermis.
CC {ECO:0000269|PubMed:2578467}.
CC -!- DEVELOPMENTAL STAGE: Low level expression from embryos at comma stage
CC to adult; maximal level in dauer larvae. {ECO:0000269|PubMed:2578467}.
CC -!- SIMILARITY: Belongs to the cuticular collagen family. {ECO:0000305}.
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DR EMBL; J01048; AAA27990.1; -; Genomic_DNA.
DR EMBL; V00148; CAA23464.1; -; Genomic_DNA.
DR EMBL; Z68301; CAA92620.1; -; Genomic_DNA.
DR EMBL; AY347575; AAP97869.1; -; mRNA.
DR PIR; B31219; B31219.
DR RefSeq; NP_501829.1; NM_069428.3.
DR AlphaFoldDB; P17656; -.
DR SMR; P17656; -.
DR STRING; 6239.W01B6.7; -.
DR PaxDb; P17656; -.
DR PeptideAtlas; P17656; -.
DR EnsemblMetazoa; W01B6.7.1; W01B6.7.1; WBGene00000593.
DR GeneID; 177872; -.
DR KEGG; cel:CELE_W01B6.7; -.
DR UCSC; W01B6.7; c. elegans.
DR CTD; 177872; -.
DR WormBase; W01B6.7; CE03759; WBGene00000593; col-2.
DR eggNOG; KOG3544; Eukaryota.
DR GeneTree; ENSGT00970000195890; -.
DR HOGENOM; CLU_001074_4_2_1; -.
DR InParanoid; P17656; -.
DR OMA; CDGCCNP; -.
DR OrthoDB; 1598349at2759; -.
DR PRO; PR:P17656; -.
DR Proteomes; UP000001940; Chromosome IV.
DR Bgee; WBGene00000593; Expressed in material anatomical entity and 2 other tissues.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:UniProtKB-KW.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR InterPro; IPR002486; Col_cuticle_N.
DR Pfam; PF01484; Col_cuticle_N; 1.
DR SMART; SM01088; Col_cuticle_N; 1.
PE 2: Evidence at transcript level;
KW Collagen; Cuticle; Disulfide bond; Reference proteome; Repeat; Signal.
FT SIGNAL 1..37
FT /evidence="ECO:0000255"
FT CHAIN 38..301
FT /note="Cuticle collagen 2"
FT /id="PRO_0000006421"
FT REGION 105..134
FT /note="Triple-helical region"
FT REGION 109..284
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 153..176
FT /note="Triple-helical region"
FT REGION 183..212
FT /note="Triple-helical region"
FT REGION 215..282
FT /note="Triple-helical region"
FT COMPBIAS 109..126
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 142..194
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 301 AA; 28025 MW; 33317E3BDAC302F9 CRC64;
MDIDARIKAY KFVAYSAVTF SVVAVVSVFI TLPMVYNYVN NVKKQIHTDV NFCKVSARDI
WSEVHLIKDA PGNNTRVARQ AYSTGGAGGG GGGGGGGCDG CCNPGPPGPG GSPGKPGKPG
KPGAPGAPGN PGKGASAPCE PVTQPPCQPC PGGPPGPAGP AGPPGPPGPD GNPGSPAGPS
GPGPAGPPGP AGPAGNDGAP GAPGGPGEPG ASEQGGPGEP GPAGPPGPAG PAGNDGAPGT
GGPGPAGPKG PPGAAGAPGA DGNPGGPGTA GKPGGEGEKG ICPKYCAIDG GVFFEDGTRR
R