ID   COL39_CAEEL             Reviewed;         323 AA.
AC   Q09455;
DT   01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1997, sequence version 1.
DT   03-AUG-2022, entry version 123.
DE   RecName: Full=Cuticle collagen 39;
DE   Flags: Precursor;
GN   Name=col-39; ORFNames=C09G5.4;
OS   Caenorhabditis elegans.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=6239;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Bristol N2;
RX   PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG   The C. elegans sequencing consortium;
RT   "Genome sequence of the nematode C. elegans: a platform for investigating
RT   biology.";
RL   Science 282:2012-2018(1998).
CC   -!- FUNCTION: Nematode cuticles are composed largely of collagen-like
CC       proteins. The cuticle functions both as an exoskeleton and as a barrier
CC       to protect the worm from its environment (By similarity).
CC       {ECO:0000250}.
CC   -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC       by disulfide bonds and other types of covalent cross-links.
CC       {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the cuticular collagen family. {ECO:0000305}.
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DR   EMBL; Z46791; CAA86757.1; -; Genomic_DNA.
DR   PIR; T19142; T19142.
DR   RefSeq; NP_496309.1; NM_063908.5.
DR   AlphaFoldDB; Q09455; -.
DR   SMR; Q09455; -.
DR   STRING; 6239.C09G5.4; -.
DR   EPD; Q09455; -.
DR   PaxDb; Q09455; -.
DR   PeptideAtlas; Q09455; -.
DR   EnsemblMetazoa; C09G5.4.1; C09G5.4.1; WBGene00000616.
DR   GeneID; 174651; -.
DR   KEGG; cel:CELE_C09G5.4; -.
DR   UCSC; C09G5.4; c. elegans.
DR   CTD; 174651; -.
DR   WormBase; C09G5.4; CE01484; WBGene00000616; col-39.
DR   eggNOG; KOG3544; Eukaryota.
DR   GeneTree; ENSGT00970000196208; -.
DR   HOGENOM; CLU_001074_4_3_1; -.
DR   InParanoid; Q09455; -.
DR   OMA; EQQECIK; -.
DR   OrthoDB; 1788688at2759; -.
DR   PRO; PR:Q09455; -.
DR   Proteomes; UP000001940; Chromosome II.
DR   Bgee; WBGene00000616; Expressed in larva and 2 other tissues.
DR   GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR   GO; GO:0042302; F:structural constituent of cuticle; IEA:UniProtKB-KW.
DR   GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR   InterPro; IPR002486; Col_cuticle_N.
DR   InterPro; IPR008160; Collagen.
DR   Pfam; PF01484; Col_cuticle_N; 1.
DR   Pfam; PF01391; Collagen; 2.
DR   SMART; SM01088; Col_cuticle_N; 1.
PE   3: Inferred from homology;
KW   Collagen; Cuticle; Disulfide bond; Reference proteome; Repeat; Signal.
FT   SIGNAL          1..28
FT                   /evidence="ECO:0000255"
FT   CHAIN           29..323
FT                   /note="Cuticle collagen 39"
FT                   /id="PRO_0000006427"
FT   REGION          80..293
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          93..125
FT                   /note="Triple-helical region"
FT   REGION          138..200
FT                   /note="Triple-helical region"
FT   REGION          203..265
FT                   /note="Triple-helical region"
FT   COMPBIAS        142..156
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   323 AA;  31595 MW;  F84F106EBBB9174C CRC64;
     MTGPTCLAVV AGISGVFVFG ALFSVAQIYN DISSFADNAH RELGEFKGFA NDAWNSMVNH
     DDATRVARSV FVRRHKKHSQ CNCGPQASNC PAGPPGPPGA PGDRGLDGQP GGAGNPGQPG
     VAGPKSHEQQ ECIKCPAGSP GPAGAPGAPG PQGPNGQPGH PGQGGSQGPA GPRGPAGDAG
     APGQVGAPGN PGQAGRGGQR SHGLPGPSGA PGPQGPSGAP GQPGQSGGQG QQGPAGPAGP
     DGQPGQPGQD GQAGAPGNDG APGADAAYCP CPSRSGSSSA VETGAAEQGY RHRAVAARHR
     NVIRRRVAKK RVVKKKRVVA RQA