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COL7_ARATH
ID   COL7_ARATH              Reviewed;         392 AA.
AC   Q9C9A9; Q5XF76;
DT   27-SEP-2004, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2001, sequence version 1.
DT   03-AUG-2022, entry version 121.
DE   RecName: Full=Zinc finger protein CONSTANS-LIKE 7;
GN   Name=COL7; OrderedLocusNames=At1g73870; ORFNames=F2P9.26;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=12692345; DOI=10.1104/pp.102.016188;
RA   Griffiths S., Dunford R.P., Coupland G., Laurie D.A.;
RT   "The evolution of CONSTANS-like gene families in barley, rice, and
RT   Arabidopsis.";
RL   Plant Physiol. 131:1855-1867(2003).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00357}.
CC   -!- SIMILARITY: Belongs to the CONSTANS family. {ECO:0000305}.
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DR   EMBL; AC016662; AAG52532.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE35518.1; -; Genomic_DNA.
DR   EMBL; BT015740; AAU84677.1; -; mRNA.
DR   EMBL; BT020183; AAV43785.1; -; mRNA.
DR   PIR; C96766; C96766.
DR   RefSeq; NP_177528.1; NM_106047.5.
DR   AlphaFoldDB; Q9C9A9; -.
DR   SMR; Q9C9A9; -.
DR   BioGRID; 28942; 9.
DR   IntAct; Q9C9A9; 7.
DR   STRING; 3702.AT1G73870.1; -.
DR   PaxDb; Q9C9A9; -.
DR   PRIDE; Q9C9A9; -.
DR   EnsemblPlants; AT1G73870.1; AT1G73870.1; AT1G73870.
DR   GeneID; 843723; -.
DR   Gramene; AT1G73870.1; AT1G73870.1; AT1G73870.
DR   KEGG; ath:AT1G73870; -.
DR   Araport; AT1G73870; -.
DR   TAIR; locus:2031581; AT1G73870.
DR   eggNOG; KOG1601; Eukaryota.
DR   HOGENOM; CLU_035373_0_0_1; -.
DR   InParanoid; Q9C9A9; -.
DR   OMA; CEEANYM; -.
DR   OrthoDB; 689469at2759; -.
DR   PhylomeDB; Q9C9A9; -.
DR   PRO; PR:Q9C9A9; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q9C9A9; baseline and differential.
DR   Genevisible; Q9C9A9; AT.
DR   GO; GO:0005730; C:nucleolus; IDA:TAIR.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IMP:TAIR.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR   GO; GO:0010223; P:secondary shoot formation; IMP:TAIR.
DR   GO; GO:0009641; P:shade avoidance; IMP:TAIR.
DR   InterPro; IPR010402; CCT_domain.
DR   InterPro; IPR000315; Znf_B-box.
DR   Pfam; PF06203; CCT; 1.
DR   Pfam; PF00643; zf-B_box; 1.
DR   SMART; SM00336; BBOX; 1.
DR   PROSITE; PS51017; CCT; 1.
DR   PROSITE; PS50119; ZF_BBOX; 1.
PE   2: Evidence at transcript level;
KW   Coiled coil; Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger.
FT   CHAIN           1..392
FT                   /note="Zinc finger protein CONSTANS-LIKE 7"
FT                   /id="PRO_0000113284"
FT   DOMAIN          345..387
FT                   /note="CCT"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00357"
FT   ZN_FING         22..65
FT                   /note="B box-type; atypical"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00024"
FT   REGION          246..271
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          326..346
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          226..254
FT                   /evidence="ECO:0000255"
FT   BINDING         22
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00024"
FT   BINDING         25
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00024"
FT   BINDING         46
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00024"
FT   BINDING         51
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00024"
SQ   SEQUENCE   392 AA;  44018 MW;  4AFF5B97A9784469 CRC64;
     MVVDVESRTA SVTGEKMAAR GCDACMKRSR ASWYCPADDA FLCQSCDASI HSANHLAKRH
     ERVRLQSSSP TETADKTTSV WYEGFRRKAR TPRSKSCAFE KLLQIESNDP LVPELGGDED
     DGFFSFSSVE ETEESLNCCV PVFDPFSDML IDDINGFCLV PDEVNNTTTN GELGEVEKAI
     MDDEGFMGFV PLDMDLEDLT MDVESLLEEE QLCLGFKEPN DVGVIKEENK VGFEINCKDL
     KRVKDEDEEE EEAKCENGGS KDSDREASND KDRKTSLFLR LDYGAVISAW DNHGSPWKTG
     IKPECMLGGN TCLPHVVGGY EKLMSSDGSV TRQQGRDGGG SDGEREARVL RYKEKRRTRL
     FSKKIRYEVR KLNAEQRPRI KGRFVKRTSL LT
 
 
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