COLA_VIBAL
ID COLA_VIBAL Reviewed; 814 AA.
AC P43154;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Microbial collagenase;
DE EC=3.4.24.3;
DE Flags: Precursor;
OS Vibrio alginolyticus.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=663;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PARTIAL PROTEIN SEQUENCE.
RC STRAIN=Chemovar. Iophagus;
RX PubMed=1311172; DOI=10.1042/bj2810703;
RA Takeuchi H., Shibano Y., Morihara K., Fukushima J., Inami S., Keil B.,
RA Gilles A.-M., Kawamoto S., Okuda K.;
RT "Structural gene and complete amino acid sequence of Vibrio alginolyticus
RT collagenase.";
RL Biochem. J. 281:703-708(1992).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Digestion of native collagen in the triple helical region at
CC Xaa-|-Gly bonds. With synthetic peptides, a preference is shown for
CC Gly at P3 and P1', Pro and Ala at P2 and P2', and hydroxyproline, Ala
CC or Arg at P3'.; EC=3.4.24.3;
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250};
CC Note=Binds 1 zinc ion. {ECO:0000250};
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- PTM: Proteolytic cleavage might yield three different active forms.
CC -!- SIMILARITY: Belongs to the peptidase M9A family. {ECO:0000305}.
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DR EMBL; X62635; CAA44501.1; -; Genomic_DNA.
DR PIR; S19658; S19658.
DR AlphaFoldDB; P43154; -.
DR SMR; P43154; -.
DR STRING; 663.BAU10_05955; -.
DR MEROPS; M09.001; -.
DR PRIDE; P43154; -.
DR eggNOG; COG3291; Bacteria.
DR BRENDA; 3.4.24.3; 6624.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR GO; GO:0004252; F:serine-type endopeptidase activity; IEA:UniProtKB-EC.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0030574; P:collagen catabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; -; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR013661; Peptidase_M9_N_dom.
DR InterPro; IPR002169; Peptidase_M9A/M9B.
DR InterPro; IPR022409; PKD/Chitinase_dom.
DR InterPro; IPR000601; PKD_dom.
DR InterPro; IPR035986; PKD_dom_sf.
DR Pfam; PF01752; Peptidase_M9; 1.
DR Pfam; PF08453; Peptidase_M9_N; 1.
DR PRINTS; PR00931; MICOLLPTASE.
DR SMART; SM00089; PKD; 1.
DR SUPFAM; SSF49299; SSF49299; 1.
DR PROSITE; PS50093; PKD; 1.
DR PROSITE; PS00142; ZINC_PROTEASE; 1.
PE 1: Evidence at protein level;
KW Collagen degradation; Direct protein sequencing; Hydrolase; Metal-binding;
KW Metalloprotease; Protease; Secreted; Signal; Zinc; Zymogen.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT PROPEP 22..75
FT /id="PRO_0000028676"
FT CHAIN 76..814
FT /note="Microbial collagenase"
FT /id="PRO_0000028677"
FT DOMAIN 609..697
FT /note="PKD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00151"
FT ACT_SITE 478
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
FT BINDING 477
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
FT BINDING 481
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
SQ SEQUENCE 814 AA; 89963 MW; E0E19C0884D2185E CRC64;
MELKILSVAI ATTLTSTGVF ALSEPVSQVT EQHAHSAHTH GVEFNRVEYQ PTATLPIQPS
KATRVQSLES LDESSTACDL EALVTESSNQ LISEILSQGA TCVNQLFSAE SRIQESVFSS
DHMYNIAKHT TTLAKGYTGG GSDELETLFL YLRAGYYAEF YNDNISFIEW VTPAVKESVD
AFVNTASFYE NSDRHGKVLS EVIITMDSAG LQHAYLPQVT QWLTRWNDQY AQHWYMRNAV
NGVFTILFGG QWNEQFVQII GNQTDLAKAL GDFALRASSI GAEDEFMAAN AGRELGRLTK
YTGNASSVVK SQLSRIFEQY EMYGRGDAVW LAAADTASYY ADCSEFGICN FETELKGLVL
SQTYTCSPTI RILSQNMTQE QHAAACSKMG YEEGYFHQSL ETGEQPVKDD HNTQLQVNIF
DSSTDYGKYA GPIFDISTDN GGMYLEGDPS QPGNIPNFIA YEASYANADH FVWNLEHEYV
HYLDGRFDLY GGFSHPTEKI VWWSEGIAEY VAQENDNQAA LETILDGSTY TLSEIFETTY
DGFDVDRIYR WGYLAVRFMF ENHKDDVNQM LVETRQGNWI NYKATITQWA NLYQSEFEQW
QQTLVSNGAP NAVITANSKG KVGESITFSS ENSTDPNGKI VSVLWDFGDG STSTQTKPTH
QYGSEGEYSV SLSVTDSEGL TATATHTVVI SALGGNDTLP QDCAVQSKVS GGRLTAGEPV
CLANQQTIWL SVPAVNESSN LAITTGNGTG NLKLEYSNSG WPDDTNLHGW SDNIGNGECI
TLSNQSNYWG YVKVSGDFEN AAIVVDFDAQ KCRQ