COLA_VIBVU
ID COLA_VIBVU Reviewed; 807 AA.
AC Q8D4Y9;
DT 11-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Microbial collagenase;
DE EC=3.4.24.3;
DE Flags: Precursor;
GN OrderedLocusNames=VV2_1146;
OS Vibrio vulnificus (strain CMCP6).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=216895;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CMCP6;
RA Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.;
RT "Complete genome sequence of Vibrio vulnificus CMCP6.";
RL Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Possesses gelatinolytic activity. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Digestion of native collagen in the triple helical region at
CC Xaa-|-Gly bonds. With synthetic peptides, a preference is shown for
CC Gly at P3 and P1', Pro and Ala at P2 and P2', and hydroxyproline, Ala
CC or Arg at P3'.; EC=3.4.24.3;
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250};
CC Note=Binds 1 zinc ion. {ECO:0000250};
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the peptidase M9A family. {ECO:0000305}.
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DR EMBL; AE016796; AAO08047.1; -; Genomic_DNA.
DR RefSeq; WP_011082042.1; NC_004460.2.
DR AlphaFoldDB; Q8D4Y9; -.
DR SMR; Q8D4Y9; -.
DR MEROPS; M09.004; -.
DR EnsemblBacteria; AAO08047; AAO08047; VV2_1146.
DR KEGG; vvu:VV2_1146; -.
DR HOGENOM; CLU_011878_0_0_6; -.
DR OMA; PLGSEHD; -.
DR Proteomes; UP000002275; Chromosome 2.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR GO; GO:0004252; F:serine-type endopeptidase activity; IEA:UniProtKB-EC.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0030574; P:collagen catabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR InterPro; IPR007280; Peptidase_C_arc/bac.
DR InterPro; IPR013661; Peptidase_M9_N_dom.
DR InterPro; IPR002169; Peptidase_M9A/M9B.
DR Pfam; PF01752; Peptidase_M9; 1.
DR Pfam; PF08453; Peptidase_M9_N; 1.
DR Pfam; PF04151; PPC; 1.
DR PRINTS; PR00931; MICOLLPTASE.
DR PROSITE; PS00142; ZINC_PROTEASE; 1.
PE 3: Inferred from homology;
KW Collagen degradation; Hydrolase; Metal-binding; Metalloprotease; Protease;
KW Secreted; Signal; Zinc; Zymogen.
FT SIGNAL 1..27
FT /evidence="ECO:0000255"
FT CHAIN 28..807
FT /note="Microbial collagenase"
FT /id="PRO_0000028680"
FT REGION 562..585
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 435
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
FT BINDING 434
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
FT BINDING 438
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
SQ SEQUENCE 807 AA; 90009 MW; B597201DE4C6A466 CRC64;
MSHLLPFPRR RLALACLLAS ISGASFGQTQ CDVAQLQQSP DLATAISSAD YACYSGWFSA
SSDTLNNIYS EASLSRVQVA LHQAVQTYQG EAEQARAIEN LGEYVRAAYY VRYNAGNVAA
FSDLLGQQFA HTINAFLANP HALDQGREQV GAMKSLTLMV DNIKQLPLTM DAMMLALQQF
NPETAKNTQW VDGLNNLFRS MAGHIANDAF YRYLASNTQH IDMLEKFAND NAWALDTDAD
FLVFNALRET GRLIASPDKA TKQKAVQVMQ RVMARYPLGS EHDKLWLAAV EMLSYFAPEA
LNGLDLPQAK RDLAARVLPN RHECQGPAII RSQDLTPEQA AKACDVLAAK EADFHQVANT
GMQPVADDHN QRVEVAVFAN NDSYVDYSAF LFGNTTDNGG QYLEGNPADE HNTARFVAYR
YANGEELSIL NLEHEYTHYL DARFNQYGSF SDNLAHGYVV WWLEGFAEYM HYKQGYQAAI
ELIAQGKMSL SQVFATSYSH DTNRIYRWGY LAVRFMLENH PQEVEGLLAL SRSGQFEQWA
QQVQTLGQQY DGEFARWLDG LEVTPENPDT DPDTPTEPSD GVTQLQANQS ITLSGKAYSE
KLFYVDVPAN TTHFSVAIEG DGDADLYMSY NQVAHYYDFE VSKFVDGSNE EIQFAADASG
YVKPGRYYLS VTGRGRYQAV NLTATIDTAA PTPPTQEQDD LAPVMLQSGQ AQHLTVHQQR
YAAVYVPEGV SEVRIWLSDL TSSDSQGNVN LYASREHWPT PEQHQFASRY AGSNQYLAIP
VEQAGYLHFS LNAPQQGDDV EMVVYFH