COMF_DICDI
ID COMF_DICDI Reviewed; 1106 AA.
AC Q557B8; Q86MX4;
DT 20-APR-2010, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 25-MAY-2022, entry version 70.
DE RecName: Full=Communication mutant protein F;
DE Flags: Precursor;
GN Name=comF-1; ORFNames=DDB_G0273257;
GN and
GN Name=comF-2; ORFNames=DDB_G0273669;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=12097910; DOI=10.1038/nature00847;
RA Gloeckner G., Eichinger L., Szafranski K., Pachebat J.A., Bankier A.T.,
RA Dear P.H., Lehmann R., Baumgart C., Parra G., Abril J.F., Guigo R.,
RA Kumpf K., Tunggal B., Cox E.C., Quail M.A., Platzer M., Rosenthal A.,
RA Noegel A.A.;
RT "Sequence and analysis of chromosome 2 of Dictyostelium discoideum.";
RL Nature 418:79-85(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 252-354, AND DISRUPTION PHENOTYPE.
RX PubMed=12871696; DOI=10.1016/s0012-1606(03)00204-5;
RA Kibler K., Nguyen T.-L., Svetz J., Van Driessche N., Ibarra M.,
RA Thompson C., Shaw C., Shaulsky G.;
RT "A novel developmental mechanism in Dictyostelium revealed in a screen for
RT communication mutants.";
RL Dev. Biol. 259:193-208(2003).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- DISRUPTION PHENOTYPE: Shows no aggregation.
CC {ECO:0000269|PubMed:12871696}.
CC -!- SIMILARITY: Belongs to the comF family. {ECO:0000305}.
CC -!- CAUTION: The gene for this protein is duplicated in strains AX3 and
CC AX4. These strains contain a duplication of a segment of 750 kb of
CC chromosome 2 compared to the corresponding sequence in strain AX2.
CC {ECO:0000305}.
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DR EMBL; AAFI02000011; EAL70525.1; -; Genomic_DNA.
DR EMBL; AAFI02000009; EAL70846.1; -; Genomic_DNA.
DR EMBL; AY221643; AAO34399.1; -; Genomic_DNA.
DR RefSeq; XP_644451.1; XM_639359.1.
DR RefSeq; XP_644799.1; XM_639707.1.
DR AlphaFoldDB; Q557B8; -.
DR PaxDb; Q557B8; -.
DR PRIDE; Q557B8; -.
DR EnsemblProtists; EAL70525; EAL70525; DDB_G0273669.
DR EnsemblProtists; EAL70846; EAL70846; DDB_G0273257.
DR GeneID; 8618901; -.
DR GeneID; 8619076; -.
DR KEGG; ddi:DDB_G0273257; -.
DR KEGG; ddi:DDB_G0273669; -.
DR dictyBase; DDB_G0273257; comF-1.
DR dictyBase; DDB_G0273669; comF-2.
DR HOGENOM; CLU_005143_0_0_1; -.
DR InParanoid; Q557B8; -.
DR OMA; HIHANCA; -.
DR PhylomeDB; Q557B8; -.
DR PRO; PR:Q557B8; -.
DR Proteomes; UP000002195; Chromosome 2.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.
DR InterPro; IPR019316; G8_domain.
DR Pfam; PF10162; G8; 1.
DR SMART; SM01225; G8; 1.
DR PROSITE; PS51484; G8; 1.
PE 3: Inferred from homology;
KW Glycoprotein; Reference proteome; Secreted; Signal.
FT SIGNAL 1..28
FT /evidence="ECO:0000255"
FT CHAIN 29..1106
FT /note="Communication mutant protein F"
FT /id="PRO_0000393589"
FT DOMAIN 254..380
FT /note="G8"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00817"
FT CARBOHYD 267
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 306
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 512
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 536
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 677
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 715
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 833
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 1106 AA; 124031 MW; A4DD3B581F08FC74 CRC64;
MKIYKKNHFL KILIIFIYLS CNILKVNADG TFSTIQPSTD IKFDKSNLEF VAEWDVSANS
ISNVVGSTDS SEFSLNYGVW GPTYNYLIAK NKSPSIKANV DYTFSFDFKL GKALGEYNNY
QSMVLSFYIP EDIAYFPWEI RTPLYTTNEF SGNFASTSYQ SKILTFRSTV DIGNSIMVLR
INRATETGPT ASSVYFRNMK ITIPSKPITT PTDLLTKDSE LIVIPKPPIS LDLQDLTKCP
YLTASDLYNW HDPTIWPNGV VPSPNQNITI PAGKRVLISA SSISQTQIYS RIVVPVNSEL
IFNDQNFTMN IRDIYVQGKF IMGTSLCRYN SFINIIFHGE KTLQDTIAQF YGSKGIAVAS
GGFISVQGKQ YHNTWSKLAS NVWSGDRVIW IQDNVNWEVG QQVLITTSVY KDELDNQNEI
LTIKAIEGKK IEFTEPIKWF KYGSQEYQSE VALLSRRIVF SSDESSSVST SFGGHILSSG
EMQFAGVQLK RMGQKNVKAR YPLHYHLGGT LNNSFISDCS VTNSYYRCYT IHGTNNVTLT
RNVAYDAFGH CYYLEDGVEV DNRISFNLGA YVHTIGKPAA GASQIGETFY QSSELTQPAD
SAASCFYITN SWNSFIGNAA SGGWAGFAFP NLPKPIGNHR TLNIIPMQYP IKEWQGNTAH
SSGYYFEDGA SIYVGGNLTF NEANGMLIYN SGRLGRTTYV NGVKNENNVV FDRLNNTKIF
LSNLGVGYWG ENIEIVGYES HDNTRPVSLF GNVWLHNALV NGQSGNILTK NSETTRQGFR
FYDFYVQTII SNTIFRNFIH STAATKRDED NVVITATTFS DVFKPQFISA TKNITFQNVP
QSQIIGHEDV ANSGSSRLFN FLDGDGSVTS SFTGKPGIPQ IVGSHVSWWK FDDSCLFSTE
WNVWVCNKGT KGLANIEFWV PGFMERELEQ DPDSYIGSIS LFGSGINDER KTLLTRNPGI
TGVSNMGWYA YFTIGTPNYL RIWTAQIAFG EYIFLAIPYP TGTTFTITSE YDYSNQYTYT
ITKTTSALAV KQGNGKQYYF DGTHLFLKLV NFMNTGGSWE SFDRVGIKIP DVYWTYIYNI
RATNTAKPSV NGYFLNLPDV RPSSTL