COP52_ORYSJ
ID COP52_ORYSJ Reviewed; 176 AA.
AC Q6Z0Q9;
DT 02-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 68.
DE RecName: Full=Putative copper transporter 5.2;
DE Short=OsCOPT5.2;
GN Name=COPT5.2; OrderedLocusNames=Os08g0455900, LOC_Os08g35490;
GN ORFNames=B1144B06.22;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- FUNCTION: Involved in the transport of copper. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the copper transporter (Ctr) (TC 1.A.56) family.
CC SLC31A subfamily. {ECO:0000305}.
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DR EMBL; AP005483; BAD10408.1; -; Genomic_DNA.
DR EMBL; AP014964; BAT05730.1; -; Genomic_DNA.
DR RefSeq; XP_015649606.1; XM_015794120.1.
DR AlphaFoldDB; Q6Z0Q9; -.
DR STRING; 4530.OS08T0455900-00; -.
DR TCDB; 1.A.56.1.12; the copper transporter (ctr) family.
DR PaxDb; Q6Z0Q9; -.
DR PRIDE; Q6Z0Q9; -.
DR EnsemblPlants; Os08t0455900-00; Os08t0455900-00; Os08g0455900.
DR GeneID; 107277569; -.
DR Gramene; Os08t0455900-00; Os08t0455900-00; Os08g0455900.
DR KEGG; osa:107277569; -.
DR eggNOG; KOG3386; Eukaryota.
DR HOGENOM; CLU_079690_1_0_1; -.
DR InParanoid; Q6Z0Q9; -.
DR OMA; FWNVHSP; -.
DR Proteomes; UP000000763; Chromosome 8.
DR Proteomes; UP000059680; Chromosome 8.
DR ExpressionAtlas; Q6Z0Q9; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0005375; F:copper ion transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0006878; P:cellular copper ion homeostasis; IBA:GO_Central.
DR InterPro; IPR007274; Cop_transporter.
DR PANTHER; PTHR12483; PTHR12483; 1.
DR Pfam; PF04145; Ctr; 1.
PE 3: Inferred from homology;
KW Copper; Copper transport; Ion transport; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..176
FT /note="Putative copper transporter 5.2"
FT /id="PRO_0000400003"
FT TRANSMEM 21..41
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 126..146
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 176 AA; 17834 MW; 8E87D3B0E12E5E06 CRC64;
MMHMSFYWGT SVTILFDGWR TSGWPGYLAS LLALFLAAAL YQHLEARRVR LRAGRRHRAG
GGGGAASSAA GPVVPAASDA RALLSAAGGR LGLGLGLGRR WMKEPRAAAS AAAAALFGLS
AAVGYLLMLA VMSFNGGVFL AVVAGLAAGH LAFRGGADEA DGGVGDDELE SPCACA