COR47_ARATH
ID COR47_ARATH Reviewed; 265 AA.
AC P31168; Q39059;
DT 01-JUL-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 2.
DT 25-MAY-2022, entry version 136.
DE RecName: Full=Dehydrin COR47;
DE AltName: Full=Cold-induced COR47 protein;
GN Name=COR47; Synonyms=RD17; OrderedLocusNames=At1g20440; ORFNames=F5M15.22;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=1731964; DOI=10.1007/bf00018452;
RA Gilmour S.J., Artus N.N., Thomashow M.F.;
RT "cDNA sequence analysis and expression of two cold-regulated genes of
RT Arabidopsis thaliana.";
RL Plant Mol. Biol. 18:13-21(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Landsberg erecta; TISSUE=Leaf;
RX PubMed=7579189; DOI=10.1007/bf00043662;
RA Welin B.V., Olson A., Palva E.T.;
RT "Structure and organization of two closely related low-temperature-induced
RT dhn/lea/rab-like genes in Arabidopsis thaliana L. Heynh.";
RL Plant Mol. Biol. 29:391-395(1995).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Iwasaki T., Kiyosue T., Yamaguchi-Shinozaki K., Shinozaki K.;
RT "The dehydration-inducible Rd17 (Cor47) gene and its promoter pegion in
RT Arabidopsis thaliana.";
RL (er) Plant Gene Register PGR97-156(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [7]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-90, AND IDENTIFICATION BY
RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=19376835; DOI=10.1104/pp.109.138677;
RA Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A.,
RA Grossmann J., Gruissem W., Baginsky S.;
RT "Large-scale Arabidopsis phosphoproteome profiling reveals novel
RT chloroplast kinase substrates and phosphorylation networks.";
RL Plant Physiol. 150:889-903(2009).
CC -!- INDUCTION: By cold shock, abscisic acid (ABA) and drought stress.
CC -!- SIMILARITY: Belongs to the plant dehydrin family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA42483.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; X59814; CAA42483.1; ALT_INIT; mRNA.
DR EMBL; X90959; CAA62449.1; -; Genomic_DNA.
DR EMBL; AB004872; BAA23547.1; -; Genomic_DNA.
DR EMBL; AC027665; AAF79614.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE29972.1; -; Genomic_DNA.
DR EMBL; AY072392; AAL62384.1; -; mRNA.
DR EMBL; AY114699; AAM48018.1; -; mRNA.
DR PIR; B86338; B86338.
DR PIR; S19226; S19226.
DR RefSeq; NP_173468.1; NM_101894.4.
DR AlphaFoldDB; P31168; -.
DR BioGRID; 23871; 1.
DR STRING; 3702.AT1G20440.1; -.
DR iPTMnet; P31168; -.
DR PaxDb; P31168; -.
DR PRIDE; P31168; -.
DR ProteomicsDB; 241109; -.
DR EnsemblPlants; AT1G20440.1; AT1G20440.1; AT1G20440.
DR GeneID; 838632; -.
DR Gramene; AT1G20440.1; AT1G20440.1; AT1G20440.
DR KEGG; ath:AT1G20440; -.
DR Araport; AT1G20440; -.
DR TAIR; locus:2034376; AT1G20440.
DR eggNOG; ENOG502SRR2; Eukaryota.
DR HOGENOM; CLU_081104_0_0_1; -.
DR InParanoid; P31168; -.
DR OMA; VYHDAPK; -.
DR OrthoDB; 1490579at2759; -.
DR PhylomeDB; P31168; -.
DR PRO; PR:P31168; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; P31168; baseline and differential.
DR Genevisible; P31168; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; HDA:TAIR.
DR GO; GO:0005507; F:copper ion binding; IDA:CAFA.
DR GO; GO:0016151; F:nickel cation binding; IDA:CAFA.
DR GO; GO:0009631; P:cold acclimation; IGI:TAIR.
DR GO; GO:0050832; P:defense response to fungus; IEP:TAIR.
DR GO; GO:0010286; P:heat acclimation; IEP:TAIR.
DR GO; GO:0009737; P:response to abscisic acid; IMP:TAIR.
DR GO; GO:0009409; P:response to cold; IEP:TAIR.
DR GO; GO:0009408; P:response to heat; IEP:TAIR.
DR GO; GO:0006970; P:response to osmotic stress; IGI:TAIR.
DR GO; GO:0009414; P:response to water deprivation; IMP:TAIR.
DR DisProt; DP00657; -.
DR InterPro; IPR000167; Dehydrin.
DR InterPro; IPR030513; Dehydrin_CS.
DR PANTHER; PTHR33346; PTHR33346; 3.
DR Pfam; PF00257; Dehydrin; 1.
DR PROSITE; PS00315; DEHYDRIN_1; 1.
DR PROSITE; PS00823; DEHYDRIN_2; 3.
PE 1: Evidence at protein level;
KW Acetylation; Phosphoprotein; Reference proteome; Repeat; Stress response.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250|UniProtKB:P42759"
FT CHAIN 2..265
FT /note="Dehydrin COR47"
FT /id="PRO_0000100040"
FT REPEAT 133..153
FT /note="1"
FT REPEAT 180..200
FT /note="2"
FT REPEAT 231..251
FT /note="3"
FT REGION 1..265
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 133..251
FT /note="3 X 21 AA repeats, Lys-rich"
FT COMPBIAS 12..29
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..102
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 115..158
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 173..205
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 223..265
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 2
FT /note="N-acetylalanine"
FT /evidence="ECO:0000250|UniProtKB:P42759"
FT MOD_RES 64
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P42763"
FT MOD_RES 90
FT /note="Phosphothreonine"
FT /evidence="ECO:0007744|PubMed:19376835"
FT CONFLICT 10
FT /note="P -> K (in Ref. 2; CAA62449)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 265 AA; 29897 MW; AEC208571588B8E6 CRC64;
MAEEYKNNVP EHETPTVATE ESPATTTEVT DRGLFDFLGK KEEEVKPQET TTLESEFDHK
AQISEPELAA EHEEVKENKI TLLEELQEKT EEDEENKPSV IEKLHRSNSS SSSSSDEEGE
EKKEKKKKIV EGEEDKKGLV EKIKEKLPGH HDKTAEDDVP VSTTIPVPVS ESVVEHDHPE
EEKKGLVEKI KEKLPGHHDE KAEDSPAVTS TPLVVTEHPV EPTTELPVEH PEEKKGILEK
IKEKLPGYHA KTTEEEVKKE KESDD
