CP26A_ARATH
ID CP26A_ARATH Reviewed; 232 AA.
AC Q9LIK6;
DT 09-JUL-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 144.
DE RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP26-1;
DE Short=PPIase CYP26-1;
DE EC=5.2.1.8;
DE AltName: Full=Cyclophilin of 26 kDa 1;
DE AltName: Full=Cyclophilin-26-1;
GN Name=CYP26-1; OrderedLocusNames=At3g22920; ORFNames=F5N5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, GENE FAMILY, AND
RP NOMENCLATURE.
RX PubMed=15051864; DOI=10.1104/pp.103.022160;
RA Romano P.G.N., Horton P., Gray J.E.;
RT "The Arabidopsis cyclophilin gene family.";
RL Plant Physiol. 134:1268-1282(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15047905; DOI=10.1104/pp.103.031005;
RA He Z., Li L., Luan S.;
RT "Immunophilins and parvulins. Superfamily of peptidyl prolyl isomerases in
RT Arabidopsis.";
RL Plant Physiol. 134:1248-1267(2004).
CC -!- FUNCTION: PPIases accelerate the folding of proteins. It catalyzes the
CC cis-trans isomerization of proline imidic peptide bonds in
CC oligopeptides (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=[protein]-peptidylproline (omega=180) = [protein]-
CC peptidylproline (omega=0); Xref=Rhea:RHEA:16237, Rhea:RHEA-
CC COMP:10747, Rhea:RHEA-COMP:10748, ChEBI:CHEBI:83833,
CC ChEBI:CHEBI:83834; EC=5.2.1.8;
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed only in flowers.
CC {ECO:0000269|PubMed:15047905, ECO:0000269|PubMed:15051864}.
CC -!- SIMILARITY: Belongs to the cyclophilin-type PPIase family.
CC {ECO:0000305}.
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DR EMBL; AY568523; AAS75306.1; -; mRNA.
DR EMBL; AP001300; BAB03037.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76691.1; -; Genomic_DNA.
DR EMBL; BT029019; ABI93928.1; -; mRNA.
DR RefSeq; NP_188932.1; NM_113192.2.
DR AlphaFoldDB; Q9LIK6; -.
DR SMR; Q9LIK6; -.
DR STRING; 3702.AT3G22920.1; -.
DR PaxDb; Q9LIK6; -.
DR PRIDE; Q9LIK6; -.
DR ProteomicsDB; 220332; -.
DR EnsemblPlants; AT3G22920.1; AT3G22920.1; AT3G22920.
DR GeneID; 821864; -.
DR Gramene; AT3G22920.1; AT3G22920.1; AT3G22920.
DR KEGG; ath:AT3G22920; -.
DR Araport; AT3G22920; -.
DR TAIR; locus:2084588; AT3G22920.
DR eggNOG; KOG0865; Eukaryota.
DR HOGENOM; CLU_012062_4_3_1; -.
DR InParanoid; Q9LIK6; -.
DR OMA; HEDGPGI; -.
DR OrthoDB; 1403619at2759; -.
DR PhylomeDB; Q9LIK6; -.
DR PRO; PR:Q9LIK6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LIK6; baseline and differential.
DR Genevisible; Q9LIK6; AT.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016018; F:cyclosporin A binding; IBA:GO_Central.
DR GO; GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IBA:GO_Central.
DR GO; GO:0006457; P:protein folding; IBA:GO_Central.
DR GO; GO:0000413; P:protein peptidyl-prolyl isomerization; IBA:GO_Central.
DR Gene3D; 2.40.100.10; -; 1.
DR InterPro; IPR029000; Cyclophilin-like_dom_sf.
DR InterPro; IPR002130; Cyclophilin-type_PPIase_dom.
DR Pfam; PF00160; Pro_isomerase; 1.
DR PRINTS; PR00153; CSAPPISMRASE.
DR SUPFAM; SSF50891; SSF50891; 1.
DR PROSITE; PS50072; CSA_PPIASE_2; 1.
PE 2: Evidence at transcript level;
KW Chaperone; Glycoprotein; Isomerase; Membrane; Reference proteome; Rotamase;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..232
FT /note="Peptidyl-prolyl cis-trans isomerase CYP26-1"
FT /id="PRO_0000429939"
FT TRANSMEM 212..232
FT /note="Helical"
FT DOMAIN 7..166
FT /note="PPIase cyclophilin-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00156"
FT CARBOHYD 108
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 232 AA; 26045 MW; D2EF0126D263A302 CRC64;
MANPKVFFDL TVDGKPAGRI VIELFADLTP RTAENFRGLC TGERGIGKCG KPIHYKGSTF
DHIVPDLMWC GGDIIFENEP IHSEELDDEY FILNHEDGPG IISMADSNGS QFQIHMKDYG
LQVDGDHVVI GKVVEGLDLM RNIEKEVITT TTRTPSKPVV IADCGELSDY RSERCYLMKN
IEKEVIIKTA KDNKPVVIAD CGGLSDDRSE RYYLINIVVA CMVLMCFWSW FV