CPB2_CAEBR
ID CPB2_CAEBR Reviewed; 566 AA.
AC Q6E3F3; A8WTZ3; Q620Z3;
DT 23-NOV-2004, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 77.
DE RecName: Full=Cytoplasmic polyadenylation element-binding protein 2;
GN Name=cpb-2; ORFNames=CBG02588;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
RX PubMed=15231741; DOI=10.1101/gr.2639304;
RA Cho S., Jin S.W., Cohen A., Ellis R.E.;
RT "A phylogeny of Caenorhabditis reveals frequent loss of introns during
RT nematode evolution.";
RL Genome Res. 14:1207-1220(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- FUNCTION: Cytoplasmic polyadenylation element binding protein that
CC binds to and regulates the translation of specific mRNAs.
CC {ECO:0000250}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAP23955.3; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AY589618; AAT72419.1; -; Genomic_DNA.
DR EMBL; AY589611; AAT72448.1; -; mRNA.
DR EMBL; HE601438; CAP23955.3; ALT_SEQ; Genomic_DNA.
DR AlphaFoldDB; Q6E3F3; -.
DR SMR; Q6E3F3; -.
DR STRING; 6238.CBG02588; -.
DR EnsemblMetazoa; CBG02588a.1; CBG02588a.1; WBGene00025614.
DR WormBase; CBG02588a; CBP30367; WBGene00025614; Cbr-cpb-2.
DR eggNOG; KOG0129; Eukaryota.
DR HOGENOM; CLU_034584_0_0_1; -.
DR InParanoid; Q6E3F3; -.
DR OrthoDB; 1075356at2759; -.
DR Proteomes; UP000008549; Chromosome II.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:1990124; C:messenger ribonucleoprotein complex; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003730; F:mRNA 3'-UTR binding; IBA:GO_Central.
DR GO; GO:0000900; F:mRNA regulatory element binding translation repressor activity; IBA:GO_Central.
DR GO; GO:0043022; F:ribosome binding; IBA:GO_Central.
DR GO; GO:0008135; F:translation factor activity, RNA binding; IBA:GO_Central.
DR GO; GO:2000766; P:negative regulation of cytoplasmic translation; IBA:GO_Central.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 4.10.640.40; -; 1.
DR InterPro; IPR032296; CEBP_ZZ.
DR InterPro; IPR038446; CEBP_ZZ_sf.
DR InterPro; IPR034819; CPEB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR12566; PTHR12566; 1.
DR Pfam; PF16366; CEBP_ZZ; 1.
DR Pfam; PF16367; RRM_7; 2.
DR SUPFAM; SSF54928; SSF54928; 2.
DR PROSITE; PS50102; RRM; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; RNA-binding.
FT CHAIN 1..566
FT /note="Cytoplasmic polyadenylation element-binding protein
FT 2"
FT /id="PRO_0000081512"
FT DOMAIN 430..512
FT /note="RRM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 17..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 64..98
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 32..46
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..82
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 83..98
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 566 AA; 65464 MW; 6FA75BDD4332FE00 CRC64;
MSKSRRVFLS IQGDDDFWGN GDQLEGKTLS SIKQQESKKM DDSVEGMEEE KYFFRQSKLG
RQNLERLHEK EEQECEEERL DWSEKVDSEE EEEDIQEQDE IITEGKETEM FDSGPETDQK
MPVDPNEGFY NNYRSYFSGR PEMLFLIRSI DESATDYYEK PFIDLYETTR KRLEMYPNTE
LNQILRCACN PNAGGGADYR VRNKHAVVVS NFREPDRRLG RYSKYYYHHN VGPEVYSRKV
FVGGLPACVK EMDILHFFSR YGRLQVDWPS KHYGCKSDSD PSVYNEPSFT PPTSHLGLSS
PPFGQINPFM TDCPPAPSDL QMSRHGSVDG GGGGFPTHGM SMRNIGFGGG SGPRSTGEGE
KKQQHLGYVF LLFEKERSVR DLVTECFEEE EGLFIILESA IEPIRVQIRP WLLADAEFLM
DFNVPINTKM VAFIGGVPRP LKAVELAHFF EQTYGNVVCV GIDIDNKFKY PRGSGRVAFS
NYHAYVQAIT DRYIVLDHED IHKRVEIKPY FFHNQSCEEC SSRYHRQYAP FFCPSLECFQ
YYCEPCWHKM HARPSRFHHM PVVKGI