CPB3_CAEBR
ID CPB3_CAEBR Reviewed; 753 AA.
AC Q6E3D5; A8WW50;
DT 23-NOV-2004, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=Cytoplasmic polyadenylation element-binding protein 3;
GN Name=cpb-3; ORFNames=CBG04067;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
RX PubMed=15231741; DOI=10.1101/gr.2639304;
RA Cho S., Jin S.W., Cohen A., Ellis R.E.;
RT "A phylogeny of Caenorhabditis reveals frequent loss of introns during
RT nematode evolution.";
RL Genome Res. 14:1207-1220(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- FUNCTION: Cytoplasmic polyadenylation element binding protein that
CC binds to and regulates the translation of specific mRNAs.
CC {ECO:0000250}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY589636; AAT72443.1; -; Genomic_DNA.
DR EMBL; AY589606; AAT72414.1; -; mRNA.
DR EMBL; HE600906; CAP24859.3; -; Genomic_DNA.
DR RefSeq; XP_002639472.1; XM_002639426.1.
DR AlphaFoldDB; Q6E3D5; -.
DR SMR; Q6E3D5; -.
DR STRING; 6238.CBG04067; -.
DR EnsemblMetazoa; CBG04067.1; CBG04067.1; WBGene00026813.
DR GeneID; 8581465; -.
DR KEGG; cbr:CBG_04067; -.
DR CTD; 8581465; -.
DR WormBase; CBG04067; CBP06639; WBGene00026813; Cbr-cpb-3.
DR eggNOG; KOG0129; Eukaryota.
DR HOGENOM; CLU_377774_0_0_1; -.
DR InParanoid; Q6E3D5; -.
DR OMA; IEMGYLH; -.
DR OrthoDB; 534330at2759; -.
DR Proteomes; UP000008549; Chromosome I.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:1990124; C:messenger ribonucleoprotein complex; IBA:GO_Central.
DR GO; GO:0043005; C:neuron projection; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0045202; C:synapse; IBA:GO_Central.
DR GO; GO:0003730; F:mRNA 3'-UTR binding; IBA:GO_Central.
DR GO; GO:0000900; F:mRNA regulatory element binding translation repressor activity; IBA:GO_Central.
DR GO; GO:0043022; F:ribosome binding; IBA:GO_Central.
DR GO; GO:0008135; F:translation factor activity, RNA binding; IBA:GO_Central.
DR GO; GO:2000766; P:negative regulation of cytoplasmic translation; IBA:GO_Central.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 4.10.640.40; -; 1.
DR InterPro; IPR032296; CEBP_ZZ.
DR InterPro; IPR038446; CEBP_ZZ_sf.
DR InterPro; IPR034819; CPEB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR12566; PTHR12566; 1.
DR Pfam; PF16366; CEBP_ZZ; 1.
DR Pfam; PF16367; RRM_7; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; RNA-binding.
FT CHAIN 1..753
FT /note="Cytoplasmic polyadenylation element-binding protein
FT 3"
FT /id="PRO_0000081516"
FT DOMAIN 298..320
FT /note="RRM"
FT REGION 111..286
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 567..589
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 153..186
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 220..253
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 263..278
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 753 AA; 83718 MW; 02C23B1DB078D385 CRC64;
MNRNCASPEE GGTTEQLVKE ASDIVERDGF ENKKKPPTLK LEHVEVVGEK SPTPATVYDL
FKKYKKPDIV TNSNGDDMNV GFDQLSSDEK NGFLRKLQML TVSSRKSVKV VGESTPSSAG
RLLKKFAPSR KPTEKISVDE PPSRFNFFGR STKKLSDSDR PSSLPKKKSA RRLLFGKEEQ
KPEPEVVKNR VLPAMTSQQS AKGAPIPINK PYRYQGPRGS LETPTDSPAK ISSNSSSSSP
IPPVPTRNHF TSMNEESPSK KRTFSRQGLS NRDNLSNGSW HGELPPRDYT SPTFSRKIFV
GGVPWDITEA ALKDSFGEFG SCAVEWPGQE ARYRSGQSNI APLTNLRNQS KYAGQAATGY
VYMIFEDERA VASLLHECSQ EIGGAGEWYF KIRAQRSKST EIRQVQIIPW VTSDSMFCED
ESLLETGIEP KRTVFVGALH GMMTAQVLHW IMEDCFGSVE CVQLDTDKFK YPIGSGRVTF
REHGAYFKAI EMGYLHVHTS KFRKRVQIDP FLESTSCMVC TTESAQCFCR NRNCFKYYCH
TCWAIDHGKD NADDVHVPVI VPSSASKAYA GPHRRPHLTS NSLSKSHGCS TNNQLSHVLS
PGFPMIVGGP SQTLSALYGY IQNNQQMMLT PAVYETPMTP PSNESNAKRR SFTEFQNPAI
FFNPSSMMTP QKSATCSETP VPAFFTNSAA FLTPNSNYYG SPNHSSSNIS QSPQQYYGAN
LYYGYMPPQV AYDGSTNGSK LSPIHVPHIP NYQ