ID   CPM_LIYV9               Reviewed;         452 AA.
AC   Q83050;
DT   30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1996, sequence version 1.
DT   02-JUN-2021, entry version 46.
DE   RecName: Full=Minor capsid protein;
DE   AltName: Full=CPm;
OS   Lettuce infectious yellows virus (isolate United States/92) (LIYV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC   Martellivirales; Closteroviridae; Crinivirus.
OX   NCBI_TaxID=651355;
OH   NCBI_TaxID=161934; Beta vulgaris (Sugar beet).
OH   NCBI_TaxID=3654; Citrullus lanatus (Watermelon) (Citrullus vulgaris).
OH   NCBI_TaxID=3656; Cucumis melo (Muskmelon).
OH   NCBI_TaxID=3661; Cucurbita maxima (Pumpkin) (Winter squash).
OH   NCBI_TaxID=3662; Cucurbita moschata (Winter crookneck squash) (Cucurbita pepo var. moschata).
OH   NCBI_TaxID=3663; Cucurbita pepo (Vegetable marrow) (Summer squash).
OH   NCBI_TaxID=4039; Daucus carota (Wild carrot).
OH   NCBI_TaxID=4236; Lactuca sativa (Garden lettuce).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=11831736; DOI=10.1006/viro.1995.1133;
RA   Klaassen V.A., Boeshore M.L., Koonin E.V., Tian T., Falk B.W.;
RT   "Genome structure and phylogenetic analysis of lettuce infectious yellows
RT   virus, a whitefly-transmitted, bipartite closterovirus.";
RL   Virology 208:99-110(1995).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=8021583; DOI=10.1099/0022-1317-75-7-1525;
RA   Klaassen V.A., Boeshore M., Dolja V.V., Falk B.W.;
RT   "Partial characterization of the lettuce infectious yellows virus genomic
RT   RNAs, identification of the coat protein gene and comparison of its amino
RT   acid sequence with those of other filamentous RNA plant viruses.";
RL   J. Gen. Virol. 75:1525-1533(1994).
RN   [3]
RP   SUBCELLULAR LOCATION.
RX   PubMed=10355756; DOI=10.1099/0022-1317-80-5-1111;
RA   Tian T., Rubio L., Yeh H.H., Crawford B., Falk B.W.;
RT   "Lettuce infectious yellows virus: in vitro acquisition analysis using
RT   partially purified virions and the whitefly Bemisia tabaci.";
RL   J. Gen. Virol. 80:1111-1117(1999).
CC   -!- FUNCTION: Minor capsid protein that encapsidates the 5'-terminal
CC       portion of the viral genome. {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000269|PubMed:10355756}.
CC       Note=Integral virion tail component. {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the closteroviridae minor capsid protein family.
CC       {ECO:0000305}.
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DR   EMBL; U15441; AAA61803.1; -; Genomic_RNA.
DR   RefSeq; NP_619698.1; NC_003618.1.
DR   GeneID; 991078; -.
DR   KEGG; vg:991078; -.
DR   Proteomes; UP000001099; Genome.
DR   GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR   InterPro; IPR002679; Closter_coat.
DR   Pfam; PF01785; Closter_coat; 1.
PE   3: Inferred from homology;
KW   Capsid protein; Reference proteome; Virion.
FT   CHAIN           1..452
FT                   /note="Minor capsid protein"
FT                   /id="PRO_0000402515"
FT   REGION          219..258
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        219..234
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   452 AA;  51962 MW;  654F7A088ADE9689 CRC64;
     MLEAECDEVE LTSRDVGDYL MFKTRITDNF TGDLTLNINT SNLIKFKTCS FFICYGDDKD
     RYELGWTSTS TSRSIFQHYK DGKYIRDFRI QDPFPILSGS TFPVVISKII ANRVAFRMSR
     RLNNVIVDKL KNNIIEFLFV VYLDVDTGKI KPNTILKNLD LSSLFIVFSN NGNNKINLPY
     EIELQTKDRG IVYTKMGNPI SYNLFNKFED LLDIETKGVD KPEDKPKPVF DDKGKQPTDT
     VPPVDNGKPD ISKPGEKQGD IDIASKFNNI VMAKLKAQSS SDPLTKKQCD QLMLSLIKWF
     EKFGITKDNA RLLIFQFGIS FSTSKENLNN ITNNIVVEND KGGFVKILKI DYLNKLYGSI
     PESHTHNLER VLLRHYAQEI LILLRSKVLE WPRKLARNKG IFEQYAYMAC DFFDTAELEL
     TEAETTALTT VKSWTMNHYK KKRQIVNSSQ LE