CPNF_DICDI
ID CPNF_DICDI Reviewed; 550 AA.
AC Q1ZXB3;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 02-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Copine-F;
GN Name=cpnF; ORFNames=DDB_G0291498;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
RN [2]
RP DEVELOPMENTAL STAGE.
RX PubMed=17259548; DOI=10.1128/ec.00322-06;
RA Damer C.K., Bayeva M., Kim P.S., Ho L.K., Eberhardt E.S., Socec C.I.,
RA Lee J.S., Bruce E.A., Goldman-Yassen A.E., Naliboff L.C.;
RT "Copine A is required for cytokinesis, contractile vacuole function, and
RT development in Dictyostelium.";
RL Eukaryot. Cell 6:430-442(2007).
CC -!- DEVELOPMENTAL STAGE: Expressed at relatively high levels in vegetative
CC cells. The expression goes down until the 10th hour of development and
CC then plateau until the 16th hour. {ECO:0000269|PubMed:17259548}.
CC -!- SIMILARITY: Belongs to the copine family. {ECO:0000305}.
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DR EMBL; AAFI02000177; EAS66821.1; -; Genomic_DNA.
DR RefSeq; XP_001134504.1; XM_001134504.1.
DR AlphaFoldDB; Q1ZXB3; -.
DR SMR; Q1ZXB3; -.
DR STRING; 44689.DDB0233133; -.
DR PaxDb; Q1ZXB3; -.
DR EnsemblProtists; EAS66821; EAS66821; DDB_G0291498.
DR GeneID; 8628206; -.
DR KEGG; ddi:DDB_G0291498; -.
DR dictyBase; DDB_G0291498; cpnF.
DR eggNOG; KOG1327; Eukaryota.
DR HOGENOM; CLU_030908_0_0_1; -.
DR InParanoid; Q1ZXB3; -.
DR OMA; CKTIKMY; -.
DR PhylomeDB; Q1ZXB3; -.
DR Reactome; R-DDI-1483206; Glycerophospholipid biosynthesis.
DR Reactome; R-DDI-6798695; Neutrophil degranulation.
DR PRO; PR:Q1ZXB3; -.
DR Proteomes; UP000002195; Chromosome 6.
DR GO; GO:0005829; C:cytosol; IDA:dictyBase.
DR GO; GO:0031090; C:organelle membrane; IDA:dictyBase.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0005544; F:calcium-dependent phospholipid binding; IBA:GO_Central.
DR GO; GO:0071277; P:cellular response to calcium ion; IBA:GO_Central.
DR CDD; cd04047; C2B_Copine; 1.
DR Gene3D; 2.60.40.150; -; 1.
DR InterPro; IPR000008; C2_dom.
DR InterPro; IPR035892; C2_domain_sf.
DR InterPro; IPR037768; C2B_Copine.
DR InterPro; IPR045052; Copine.
DR InterPro; IPR010734; Copine_C.
DR InterPro; IPR002035; VWF_A.
DR InterPro; IPR036465; vWFA_dom_sf.
DR PANTHER; PTHR10857; PTHR10857; 1.
DR Pfam; PF00168; C2; 1.
DR Pfam; PF07002; Copine; 1.
DR SMART; SM00239; C2; 2.
DR SUPFAM; SSF49562; SSF49562; 1.
DR SUPFAM; SSF53300; SSF53300; 1.
DR PROSITE; PS50004; C2; 2.
DR PROSITE; PS50234; VWFA; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..550
FT /note="Copine-F"
FT /id="PRO_0000330659"
FT DOMAIN 1..115
FT /note="C2 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00041"
FT DOMAIN 123..246
FT /note="C2 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00041"
FT DOMAIN 296..521
FT /note="VWFA"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00219"
SQ SEQUENCE 550 AA; 62897 MW; 7EEE2A137A06F0E8 CRC64;
MAETIRPISK IELRFKLADI KKPSSQIIVY CNSGDSKRFD LIGATERIDN KSEPFFNTTI
NIDYYFESVQ KLYLLAINHN LKTLDFTKID QLDVVGEFTP TIGDLISRDG KRLIGDIKDK
DKITGKIEIT AEEIYETGHN IILQLKGTKL DKKDLFSSDP YFKIYKSSPS GNSIVFESSV
IKNNINPIFD PIVIRLQELN GGCMFRELTF EFWDHNDIVD DELIGSFRTN TDEILSGIIK
EFPIINQKLK SKKSNYEHSG IINFIDSRIL YKPTIQDFIN GNGNGNGNGD GNCLIDLMVA
IDCTESNGDQ KLETSLHYNV KPHQNQYIRS LLALESQLLN NFGVKLEKRV EVFGFGAVIN
KHPNHNFRFH YIIDDRPNTL KAGISGVIEL YDKAIPKIQF TSPTKISSII EDATRYSLQD
FHSTQLKYSI LLILIDSDIT DYESTVDEIV EASKAPLSII FIGVGEYSFQ NIPQLDGEKN
GNIRLIGRFD RKQIRDNVHF ISFKEFSINQ IDFQNEILRK LPNQLTEFME FKNYLPNGLS
YTQTEIKKIK