CPSF2_XENLA
ID CPSF2_XENLA Reviewed; 783 AA.
AC Q9W799;
DT 18-OCT-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1999, sequence version 1.
DT 03-AUG-2022, entry version 86.
DE RecName: Full=Cleavage and polyadenylation specificity factor subunit 2;
DE AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit;
DE Short=CPSF 100 kDa subunit;
GN Name=cpsf2;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=10409759; DOI=10.1128/mcb.19.8.5707;
RA Dickson K.S., Bilger A., Ballantyne S., Wickens M.P.;
RT "The cleavage and polyadenylation specificity factor in Xenopus laevis
RT oocytes is a cytoplasmic factor involved in regulated polyadenylation.";
RL Mol. Cell. Biol. 19:5707-5717(1999).
RN [2]
RP IDENTIFICATION IN A COMPLEX WITH CPSF2, CPSF73, CPSF160 AND SYMPK, AND
RP SUBCELLULAR LOCATION.
RX PubMed=12006661; DOI=10.1091/mbc.01-12-0567;
RA Hofmann I., Schnoelzer M., Kaufmann I., Franke W.W.;
RT "Symplekin, a constitutive protein of karyo- and cytoplasmic particles
RT involved in mRNA biogenesis in Xenopus laevis oocytes.";
RL Mol. Biol. Cell 13:1665-1676(2002).
RN [3]
RP INTERACTION WITH SYMPK.
RX PubMed=15550246; DOI=10.1016/j.cell.2004.10.029;
RA Barnard D.C., Ryan K., Manley J.L., Richter J.D.;
RT "Symplekin and xGLD-2 are required for CPEB-mediated cytoplasmic
RT polyadenylation.";
RL Cell 119:641-651(2004).
CC -!- FUNCTION: CPSF plays a key role in pre-mRNA 3'-end formation,
CC recognizing the AAUAAA signal sequence and interacting with poly(A)
CC polymerase and other factors to bring about cleavage and poly(A)
CC addition. In X.laevis this subunit seems to be predominantly involved
CC in cytoplasmic polyadenylation reaction. May also be involved in the
CC histone 3'-end pre-mRNA processing.
CC -!- SUBUNIT: CPSF is a heterotetramer composed of four distinct subunits
CC 160, 100, 70 and 30 kDa (By similarity). Identification in a complex
CC with cpsf2, cpsf73, cpsf160 and sympk. Interacts with sympk.
CC {ECO:0000250, ECO:0000269|PubMed:12006661,
CC ECO:0000269|PubMed:15550246}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Cytoplasm
CC {ECO:0000269|PubMed:12006661}.
CC -!- SIMILARITY: Belongs to the metallo-beta-lactamase superfamily. RNA-
CC metabolizing metallo-beta-lactamase-like family. CPSF2/YSH1 subfamily.
CC {ECO:0000305}.
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DR EMBL; AF139986; AAD33061.1; -; mRNA.
DR RefSeq; NP_001081123.1; NM_001087654.1.
DR AlphaFoldDB; Q9W799; -.
DR SMR; Q9W799; -.
DR BioGRID; 98996; 1.
DR IntAct; Q9W799; 1.
DR GeneID; 394394; -.
DR KEGG; xla:394394; -.
DR CTD; 394394; -.
DR Xenbase; XB-GENE-950598; cpsf2.S.
DR OrthoDB; 1314980at2759; -.
DR Proteomes; UP000186698; Chromosome 8S.
DR Bgee; 394394; Expressed in gastrula and 19 other tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006379; P:mRNA cleavage; IEA:InterPro.
DR GO; GO:0006378; P:mRNA polyadenylation; IEA:InterPro.
DR CDD; cd16293; CPSF2-like_MBL-fold; 1.
DR Gene3D; 3.60.15.10; -; 1.
DR InterPro; IPR022712; Beta_Casp.
DR InterPro; IPR027075; CPSF2.
DR InterPro; IPR025069; Cpsf2_C.
DR InterPro; IPR035639; CPSF2_MBL.
DR InterPro; IPR001279; Metallo-B-lactamas.
DR InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR InterPro; IPR011108; RMMBL.
DR PANTHER; PTHR45922; PTHR45922; 1.
DR Pfam; PF10996; Beta-Casp; 1.
DR Pfam; PF13299; CPSF100_C; 1.
DR Pfam; PF16661; Lactamase_B_6; 1.
DR Pfam; PF07521; RMMBL; 1.
DR SMART; SM01027; Beta-Casp; 1.
DR SUPFAM; SSF56281; SSF56281; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; mRNA processing; Nucleus; Reference proteome; RNA-binding.
FT CHAIN 1..783
FT /note="Cleavage and polyadenylation specificity factor
FT subunit 2"
FT /id="PRO_0000074395"
FT REGION 407..427
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 783 AA; 88986 MW; F68558C78CF0AEDC CRC64;
MTSIIKLTTL VGAQEESAVC YLLQVDEFRF LLDCGWDENF SMDIIDSVKK YVHQVDAVLL
SHPDPLHLGA LPYAVGKLGL NCAIYATIPV YKMGQMFMYD LYQSRHNTED FSLFSLDDVD
CAFDKIQQLK YNQIVHLKGK GHGLSITPLP AGHMIGGTIW KIVKDGEEEI VYAVDFNHKR
EIHLNGCSLE MINRPSLLIT DSFNATYVQP RRKQRDEQLL TNVLETLRGD GNVLIAVDTA
GRVLELAQLL DQIWRTKDAG LGVYSLALLN NVSYNVVEFS KSQVEWMSDK LMRCFEDKRN
NPFQFRHLTL CHGYSDLARV PSPKVVLASQ PDLECGFSRE LFIQWCQDPK NSVILTYRTT
PGTLARFLID HPSERIIDIE LRKRVKLEGK ELEEYVEKEK LKKEAAKKLE QSKEADLDSS
DDSDVEEDID QITSHKAKHD LMMKNEGSRK GSFFKQAKKS YPMFPAPEDR IKWDEYGEII
KPEDFLVPEL QVTEDEKTKL ESGLTNGDEP MDQDLSDVPT KCVSTTESME IKARVTYIDY
EGRSDGDSIK KIINQMKPRQ LIIVHGPPDA TQDLAEACRA FGGKDIKVYT PKLHETVDAT
SETHIYQVRL KDSLVSSLKF CKAKDTELAW IDGVLDMRVS KVDTGVILEE RELKDEGEDM
EMQVDTQVMD ASTIAQQKVI KSLFGDDDKE FSEESEIIPT LEPLPSNEVP GHQSVFMNEP
RLSDFKQVLL REGIHAEFVG GVLVCNNMVA VRRTETGRIG LEGCLCEDFF KIRELLYEQY
AIV