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CP_CSVMV
ID   CP_CSVMV                Reviewed;        1372 AA.
AC   Q66283;
DT   05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1996, sequence version 1.
DT   02-JUN-2021, entry version 89.
DE   RecName: Full=Putative Polyprotein CP;
DE   Contains:
DE     RecName: Full=Capsid protein;
DE     AltName: Full=Coat protein;
DE              Short=CP;
DE   Contains:
DE     RecName: Full=Movement protein;
DE              Short=Mov;
DE     AltName: Full=Cell-to-cell transport protein;
GN   ORFNames=ORF 1;
OS   Cassava vein mosaic virus (CsVMV).
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Ortervirales; Caulimoviridae; Cavemovirus.
OX   NCBI_TaxID=38062;
OH   NCBI_TaxID=3983; Manihot esculenta (Cassava) (Jatropha manihot).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=9645200; DOI=10.1007/s007050050344;
RA   de Kochko A., Verdaguer B., Taylor N., Carcamo R., Beachy R.N., Fauquet C.;
RT   "Cassava vein mosaic virus (CsVMV), type species for a new genus of plant
RT   double stranded DNA viruses?";
RL   Arch. Virol. 143:945-962(1998).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA   Kochko de A., Verdaguer B., Beachy R.N., Fauquet C.;
RL   Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: [Capsid protein]: Virion {ECO:0000305}.
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DR   EMBL; U59751; AAB03325.1; -; Genomic_DNA.
DR   RefSeq; NP_056846.1; NC_001648.1.
DR   SMR; Q66283; -.
DR   PRIDE; Q66283; -.
DR   GeneID; 1403415; -.
DR   KEGG; vg:1403415; -.
DR   Proteomes; UP000002244; Genome.
DR   GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   Gene3D; 2.40.70.10; -; 1.
DR   InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR   InterPro; IPR028919; Viral_movement.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   Pfam; PF01107; MP; 1.
DR   Pfam; PF00098; zf-CCHC; 1.
DR   SMART; SM00343; ZnF_C2HC; 1.
DR   SUPFAM; SSF57756; SSF57756; 1.
DR   PROSITE; PS50158; ZF_CCHC; 1.
PE   4: Predicted;
KW   Capsid protein; Coiled coil; Metal-binding; Reference proteome; Virion;
KW   Zinc; Zinc-finger.
FT   CHAIN           1..1372
FT                   /note="Putative Polyprotein CP"
FT                   /id="PRO_0000397902"
FT   CHAIN           ?330..?814
FT                   /note="Capsid protein"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_0000397903"
FT   CHAIN           ?880..?1207
FT                   /note="Movement protein"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_0000397904"
FT   ZN_FING         739..756
FT                   /note="CCHC-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT   REGION          372..398
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          126..153
FT                   /evidence="ECO:0000255"
FT   COILED          299..350
FT                   /evidence="ECO:0000255"
FT   COILED          1162..1189
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   1372 AA;  163728 MW;  6DBE63116A8DD93F CRC64;
     MDSKDFTQLN LEEHSYKVNR EKLPIDSYIQ YGGFTYANFT PYIIHGDDGF GEHKQLNWTN
     KLLWNKLGKL NIKDTQILMQ NNISEEQHNE LISLEAQKIA RENLADRINY LQNINTSIDF
     KLWKMNKENL ERQELLLRQI NELKEEIKSL KNIPSTVAII PTNTYTINMI RTETEDWKYF
     KYIEKELVQN KTEAIAKILD NSYIINDNLG LLYERYEEIN PTPKPYKRPE TIFDTPQYAK
     YIRNQKRQEE YEKQQELKKE NENKEYQEFL EWKEKQQKDK GKGIQTVYPT LIIPDIKPEK
     QKKEDMMLEM IKNLQNELEQ LKIQRHKEHE KQAELTKIQM LEEELEEELD PDNLEKEVLN
     NIQNIQISSD ISESSEINEI SDNETEQISG SDSDYNNEQI NVKIEGEEYE YKDNYRYYKP
     QPPYYKKDIR RERQYKGQSS QRADYIKNRR EQFESTYQAN MNTTINDSGE ILNLDCTTPE
     EAEDRIQKWT QSMSIALVKQ QLSNEQAKQF IRRTFIGNVK EWYKNLTNEA KQKLEGNAPL
     LSLTHMELGL RAEFGKLGIE SDVEKHEKKT SIARHKILQL QICSMDHQNL NAYLCEFQEY
     YYSANYTEAE SENILNMFYS KLPEPWGQQV LNGYLSEIKG KNLLDSIGAR MTYLQEFISD
     KCKENWTQKQ ARKIQLSKNL DCSYYEVGKY GCKQIRPHKR KRYYKKYIPI KRKYFNKKRY
     KKYYRPKKFL KRKNPHKACK CYNCGEEGHI SPNCKKPKKK TRINNLEALE FKNTEMENLE
     FETNKNDIIW VEEIEVIQPL HYEEEEKYKG NYSDRILQNP YYINSISIEE LDNLDWEFEY
     QEDIEDDLEY QNFVYQESND NWYSDQENWY SDEQYLGIYM FIGETSGENN QDNMEGIIKE
     YNKTEPEKIN KIIFTSEKFK QIMENDLNMT KDKIFHNNKL KKLFGKKEIE YYIVTDIEHP
     IDVKYVQNQD KIINLPLYNQ EIFENEIQKI PDKDQNKIRN IHLAAVEIVV KAYFREGIDT
     PFEIILCDDR ITYPQEGSLV EVLIGNLIYQ KVKFTKIINY SISIEDKNLD KSLVMYWNLE
     GIKMIKDSKI FSIRLRNLYV LSNKHIVKNK KQYNGNIIIE PIFQDVIQNN NRNYIEYGKP
     GKFDRTKLKS YSRRFNEPLR LDDRTNIQRE KDQIEKADHN LELQKELNNL NYYSQQGQSS
     NVLDIPKILK IENTKNNYKQ FHIIGKITEG RLNKFYPILI DTGAADSYIS SKILEDEKLV
     SNKLSKVVTS YNADNEKHIY DRNTEVIIEL IDKNNEKYKI NFIGLVDQLR LLEGGKAEIL
     LGMNILQNLK PYCITDDYLE INLGFRCIKI NRIKKDIFEI REDLQQMNVL NE
 
 
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