CP_CSVMV
ID CP_CSVMV Reviewed; 1372 AA.
AC Q66283;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 02-JUN-2021, entry version 89.
DE RecName: Full=Putative Polyprotein CP;
DE Contains:
DE RecName: Full=Capsid protein;
DE AltName: Full=Coat protein;
DE Short=CP;
DE Contains:
DE RecName: Full=Movement protein;
DE Short=Mov;
DE AltName: Full=Cell-to-cell transport protein;
GN ORFNames=ORF 1;
OS Cassava vein mosaic virus (CsVMV).
OC Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC Ortervirales; Caulimoviridae; Cavemovirus.
OX NCBI_TaxID=38062;
OH NCBI_TaxID=3983; Manihot esculenta (Cassava) (Jatropha manihot).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=9645200; DOI=10.1007/s007050050344;
RA de Kochko A., Verdaguer B., Taylor N., Carcamo R., Beachy R.N., Fauquet C.;
RT "Cassava vein mosaic virus (CsVMV), type species for a new genus of plant
RT double stranded DNA viruses?";
RL Arch. Virol. 143:945-962(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Kochko de A., Verdaguer B., Beachy R.N., Fauquet C.;
RL Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: [Capsid protein]: Virion {ECO:0000305}.
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DR EMBL; U59751; AAB03325.1; -; Genomic_DNA.
DR RefSeq; NP_056846.1; NC_001648.1.
DR SMR; Q66283; -.
DR PRIDE; Q66283; -.
DR GeneID; 1403415; -.
DR KEGG; vg:1403415; -.
DR Proteomes; UP000002244; Genome.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 2.40.70.10; -; 1.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR028919; Viral_movement.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR Pfam; PF01107; MP; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; SSF57756; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Capsid protein; Coiled coil; Metal-binding; Reference proteome; Virion;
KW Zinc; Zinc-finger.
FT CHAIN 1..1372
FT /note="Putative Polyprotein CP"
FT /id="PRO_0000397902"
FT CHAIN ?330..?814
FT /note="Capsid protein"
FT /evidence="ECO:0000255"
FT /id="PRO_0000397903"
FT CHAIN ?880..?1207
FT /note="Movement protein"
FT /evidence="ECO:0000255"
FT /id="PRO_0000397904"
FT ZN_FING 739..756
FT /note="CCHC-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT REGION 372..398
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 126..153
FT /evidence="ECO:0000255"
FT COILED 299..350
FT /evidence="ECO:0000255"
FT COILED 1162..1189
FT /evidence="ECO:0000255"
SQ SEQUENCE 1372 AA; 163728 MW; 6DBE63116A8DD93F CRC64;
MDSKDFTQLN LEEHSYKVNR EKLPIDSYIQ YGGFTYANFT PYIIHGDDGF GEHKQLNWTN
KLLWNKLGKL NIKDTQILMQ NNISEEQHNE LISLEAQKIA RENLADRINY LQNINTSIDF
KLWKMNKENL ERQELLLRQI NELKEEIKSL KNIPSTVAII PTNTYTINMI RTETEDWKYF
KYIEKELVQN KTEAIAKILD NSYIINDNLG LLYERYEEIN PTPKPYKRPE TIFDTPQYAK
YIRNQKRQEE YEKQQELKKE NENKEYQEFL EWKEKQQKDK GKGIQTVYPT LIIPDIKPEK
QKKEDMMLEM IKNLQNELEQ LKIQRHKEHE KQAELTKIQM LEEELEEELD PDNLEKEVLN
NIQNIQISSD ISESSEINEI SDNETEQISG SDSDYNNEQI NVKIEGEEYE YKDNYRYYKP
QPPYYKKDIR RERQYKGQSS QRADYIKNRR EQFESTYQAN MNTTINDSGE ILNLDCTTPE
EAEDRIQKWT QSMSIALVKQ QLSNEQAKQF IRRTFIGNVK EWYKNLTNEA KQKLEGNAPL
LSLTHMELGL RAEFGKLGIE SDVEKHEKKT SIARHKILQL QICSMDHQNL NAYLCEFQEY
YYSANYTEAE SENILNMFYS KLPEPWGQQV LNGYLSEIKG KNLLDSIGAR MTYLQEFISD
KCKENWTQKQ ARKIQLSKNL DCSYYEVGKY GCKQIRPHKR KRYYKKYIPI KRKYFNKKRY
KKYYRPKKFL KRKNPHKACK CYNCGEEGHI SPNCKKPKKK TRINNLEALE FKNTEMENLE
FETNKNDIIW VEEIEVIQPL HYEEEEKYKG NYSDRILQNP YYINSISIEE LDNLDWEFEY
QEDIEDDLEY QNFVYQESND NWYSDQENWY SDEQYLGIYM FIGETSGENN QDNMEGIIKE
YNKTEPEKIN KIIFTSEKFK QIMENDLNMT KDKIFHNNKL KKLFGKKEIE YYIVTDIEHP
IDVKYVQNQD KIINLPLYNQ EIFENEIQKI PDKDQNKIRN IHLAAVEIVV KAYFREGIDT
PFEIILCDDR ITYPQEGSLV EVLIGNLIYQ KVKFTKIINY SISIEDKNLD KSLVMYWNLE
GIKMIKDSKI FSIRLRNLYV LSNKHIVKNK KQYNGNIIIE PIFQDVIQNN NRNYIEYGKP
GKFDRTKLKS YSRRFNEPLR LDDRTNIQRE KDQIEKADHN LELQKELNNL NYYSQQGQSS
NVLDIPKILK IENTKNNYKQ FHIIGKITEG RLNKFYPILI DTGAADSYIS SKILEDEKLV
SNKLSKVVTS YNADNEKHIY DRNTEVIIEL IDKNNEKYKI NFIGLVDQLR LLEGGKAEIL
LGMNILQNLK PYCITDDYLE INLGFRCIKI NRIKKDIFEI REDLQQMNVL NE