CQ078_MOUSE
ID CQ078_MOUSE Reviewed; 290 AA.
AC Q5QR91; B0QZI9; B9EK11; Q5SWU4;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 11-SEP-2007, sequence version 2.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Uncharacterized protein C17orf78 homolog;
GN Name=Gm11437;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=SWR/J; TISSUE=Liver;
RA Barber M.C., Travers M.T.;
RT "Tissue-specific expression of a protein encoding gene located within
RT intron 1 of the mammalian Acetyl-CoA carboxylase-alpha gene.";
RL Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C57BL/6J;
RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X.,
RA Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y.,
RA Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S.,
RA Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R.,
RA Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K.,
RA Eichler E.E., Ponting C.P.;
RT "Lineage-specific biology revealed by a finished genome assembly of the
RT mouse.";
RL PLoS Biol. 7:E1000112-E1000112(2009).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
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DR EMBL; AJ844653; CAH59902.1; -; mRNA.
DR EMBL; AL596447; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC147775; AAI47776.1; -; mRNA.
DR EMBL; BC147791; AAI47792.1; -; mRNA.
DR CCDS; CCDS25184.1; -.
DR RefSeq; NP_001033021.2; NM_001037932.2.
DR AlphaFoldDB; Q5QR91; -.
DR SMR; Q5QR91; -.
DR STRING; 10090.ENSMUSP00000056084; -.
DR iPTMnet; Q5QR91; -.
DR PhosphoSitePlus; Q5QR91; -.
DR MaxQB; Q5QR91; -.
DR PaxDb; Q5QR91; -.
DR PRIDE; Q5QR91; -.
DR ProteomicsDB; 284009; -.
DR Antibodypedia; 73298; 83 antibodies from 17 providers.
DR Ensembl; ENSMUST00000050771; ENSMUSP00000056084; ENSMUSG00000051452.
DR GeneID; 628813; -.
DR KEGG; mmu:628813; -.
DR UCSC; uc007kqi.2; mouse.
DR MGI; MGI:3650287; Gm11437.
DR VEuPathDB; HostDB:ENSMUSG00000051452; -.
DR eggNOG; ENOG502SUFK; Eukaryota.
DR GeneTree; ENSGT00390000008122; -.
DR HOGENOM; CLU_083643_0_0_1; -.
DR InParanoid; Q5QR91; -.
DR OMA; FIIFEVP; -.
DR PhylomeDB; Q5QR91; -.
DR TreeFam; TF337703; -.
DR BioGRID-ORCS; 628813; 1 hit in 63 CRISPR screens.
DR ChiTaRS; Gm11437; mouse.
DR PRO; PR:Q5QR91; -.
DR Proteomes; UP000000589; Chromosome 11.
DR RNAct; Q5QR91; protein.
DR Bgee; ENSMUSG00000051452; Expressed in jejunum and 6 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR031668; DUF4711.
DR PANTHER; PTHR36870; PTHR36870; 1.
DR Pfam; PF15829; DUF4711; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..290
FT /note="Uncharacterized protein C17orf78 homolog"
FT /id="PRO_0000300631"
FT TRANSMEM 202..222
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 153..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 246..276
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 255..276
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 64
FT /note="Q -> R (in Ref. 1; CAH59902)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 290 AA; 32583 MW; 05D252420B2CB6EF CRC64;
MDTILVFSLM IASYDSNKND LRKSSCQVEQ WPSFFSEDVR SNKDLVVRVP LEIHTDTKGT
PFIQNQPIAT LRCLGSGRRV TVHLVYSERR PKVKYIMKNL PVITDLPRNS TASPRCHLRA
TSQFQNGSLL TAFLPGISQC TVYSAKDRSA SSEMVPITTS STTPRSKGDE ATSTGAFPNP
LTQGIDMSLK RRQKWSLVVK ALIAVTLLLG GAAIIVFVIF EVPCPSQCLR VRQLCQCQWL
WRRKRKEEDQ KPGTTESQLD SQPEKVKHNV PNSSDSKKTT DIAIIYQTYF