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CRK6_ORYSJ
ID   CRK6_ORYSJ              Reviewed;         695 AA.
AC   Q0D5R3; Q84S61;
DT   07-SEP-2016, integrated into UniProtKB/Swiss-Prot.
DT   17-OCT-2006, sequence version 1.
DT   03-AUG-2022, entry version 114.
DE   RecName: Full=Cysteine-rich receptor-like protein kinase 6 {ECO:0000305};
DE            Short=Cysteine-rich RLK6 {ECO:0000305};
DE            EC=2.7.11.- {ECO:0000305};
DE   Flags: Precursor;
GN   Name=CRK6 {ECO:0000303|PubMed:27176732};
GN   OrderedLocusNames=Os07g0541400 {ECO:0000312|EMBL:BAF21810.1},
GN   LOC_Os07g35690 {ECO:0000305};
GN   ORFNames=OJ1008_E09.114 {ECO:0000312|EMBL:BAD30125.1},
GN   P0458H05.131 {ECO:0000312|EMBL:BAC65053.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   FUNCTION, INDUCTION BY BENZOTHIADIAZOLE, AND MUTAGENESIS OF ASP-488.
RX   PubMed=27176732; DOI=10.1371/journal.pgen.1006049;
RA   Chern M., Xu Q., Bart R.S., Bai W., Ruan D., Sze-To W.H., Canlas P.E.,
RA   Jain R., Chen X., Ronald P.C.;
RT   "A genetic screen identifies a requirement for cysteine-rich-receptor-like
RT   kinases in rice NH1 (OsNPR1)-mediated immunity.";
RL   PLoS Genet. 12:E1006049-E1006049(2016).
CC   -!- FUNCTION: Involved in disease resistance. Required for NPR1/NH1-
CC       mediated immunity to the bacterial blight pathogen Xanthomomas oryzae
CC       pv. oryzae (Xoo). Required for the benzothiadiazole (BTH)-induced
CC       immune response. Possesses kinase activity in vitro.
CC       {ECO:0000269|PubMed:27176732}.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Single-pass membrane
CC       protein {ECO:0000255}.
CC   -!- INDUCTION: Induced by benzothiadiazole (BTH).
CC       {ECO:0000269|PubMed:27176732}.
CC   -!- SIMILARITY: Belongs to the protein kinase superfamily. Ser/Thr protein
CC       kinase family. CRK subfamily. {ECO:0000255|PROSITE-ProRule:PRU00159}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAC65053.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC       Sequence=BAD30125.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AP003736; BAD30125.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP005786; BAC65053.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP008213; BAF21810.1; -; Genomic_DNA.
DR   EMBL; AP014963; BAT01968.1; -; Genomic_DNA.
DR   RefSeq; XP_015644888.1; XM_015789402.1.
DR   RefSeq; XP_015644889.1; XM_015789403.1.
DR   AlphaFoldDB; Q0D5R3; -.
DR   SMR; Q0D5R3; -.
DR   STRING; 4530.OS07T0541400-01; -.
DR   PaxDb; Q0D5R3; -.
DR   PRIDE; Q0D5R3; -.
DR   EnsemblPlants; Os07t0541400-01; Os07t0541400-01; Os07g0541400.
DR   GeneID; 4343500; -.
DR   Gramene; Os07t0541400-01; Os07t0541400-01; Os07g0541400.
DR   KEGG; osa:4343500; -.
DR   eggNOG; ENOG502QWDY; Eukaryota.
DR   HOGENOM; CLU_000288_35_7_1; -.
DR   InParanoid; Q0D5R3; -.
DR   OMA; CAPYPPS; -.
DR   OrthoDB; 345452at2759; -.
DR   Proteomes; UP000000763; Chromosome 7.
DR   Proteomes; UP000059680; Chromosome 7.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004672; F:protein kinase activity; IDA:UniProtKB.
DR   GO; GO:0004674; F:protein serine/threonine kinase activity; IBA:GO_Central.
DR   GO; GO:0042742; P:defense response to bacterium; IMP:UniProtKB.
DR   GO; GO:0006468; P:protein phosphorylation; IBA:GO_Central.
DR   Gene3D; 3.30.430.20; -; 2.
DR   InterPro; IPR002902; GNK2.
DR   InterPro; IPR038408; GNK2_sf.
DR   InterPro; IPR011009; Kinase-like_dom_sf.
DR   InterPro; IPR000719; Prot_kinase_dom.
DR   InterPro; IPR017441; Protein_kinase_ATP_BS.
DR   InterPro; IPR001245; Ser-Thr/Tyr_kinase_cat_dom.
DR   InterPro; IPR008271; Ser/Thr_kinase_AS.
DR   Pfam; PF07714; PK_Tyr_Ser-Thr; 1.
DR   Pfam; PF01657; Stress-antifung; 2.
DR   SMART; SM00220; S_TKc; 1.
DR   SUPFAM; SSF56112; SSF56112; 1.
DR   PROSITE; PS51473; GNK2; 2.
DR   PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
DR   PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
DR   PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PE   1: Evidence at protein level;
KW   ATP-binding; Disulfide bond; Glycoprotein; Kinase; Membrane;
KW   Nucleotide-binding; Plant defense; Reference proteome; Repeat;
KW   Serine/threonine-protein kinase; Signal; Transferase; Transmembrane;
KW   Transmembrane helix.
FT   SIGNAL          1..31
FT                   /evidence="ECO:0000255"
FT   CHAIN           32..695
FT                   /note="Cysteine-rich receptor-like protein kinase 6"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_5007318556"
FT   TOPO_DOM        32..294
FT                   /note="Extracellular"
FT                   /evidence="ECO:0000305"
FT   TRANSMEM        295..315
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        316..695
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000305"
FT   DOMAIN          38..142
FT                   /note="Gnk2-homologous 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00806"
FT   DOMAIN          151..261
FT                   /note="Gnk2-homologous 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00806"
FT   DOMAIN          363..634
FT                   /note="Protein kinase"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   REGION          658..682
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   ACT_SITE        488
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         369..377
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         391
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   CARBOHYD        49
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        53
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        70
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        101
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   CARBOHYD        178
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT   DISULFID        96..105
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00806"
FT   DISULFID        108..133
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00806"
FT   DISULFID        215..224
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00806"
FT   DISULFID        227..252
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00806"
FT   MUTAGEN         488
FT                   /note="D->N: Loss of kinase activity."
FT                   /evidence="ECO:0000269|PubMed:27176732"
SQ   SEQUENCE   695 AA;  76461 MW;  AB3270ED6076F822 CRC64;
     MRRHRPYLDG VAAAAATFLL AVLLHAPLAA GEDEPPPWVL CGPYPPSGNY SKNGTYQVNL
     DLLSTTLPKN TSSSPAMYAT GTVGDVPDKV YGLALCRGDA NASACERCVA AALRDAPRRC
     PLVKDVLVFY DLCQLRYSNR DFFLDDDYFV TTYTLQRSRR VGAAAAAAFD AAVAVLVNAT
     ADYAAADSSR RYGTGEEEGV DGDSDRPKIY ALAQCTPDKT PEVCRTCLST VIGQLPKEFS
     GRTGGGMFGV WCNFRYEVFP FFSGRPLLQL PAFVETPPPP PSPSATSGEK TKNRIGTVLA
     IVMPAIAAIL LMVVACFCCW KRIKKRRPEE QTFLSYSVSS DDIQSIDSLI LDLPTIRVAT
     DDFADTKMIG QGGFGMVYKG VLPDGQEIAV KRLCQSSRQG IGELKSELIL VAKLYHKNLV
     RLIGVCLEQQ EKILVYEYMP NGSLDIVLFD TDKNRELDWG KRFKIINGIA RGLQYLHEDS
     QLKIVHRDLK ASNILLDFDY SPKISDFGLA KIFGGDQSED VTNRIAGTYG YMAPEYAMRG
     NYSIKSDVFS FGVLVLEIIT GRRNTGSYDS GQDVDLLNLV WEHWTRGNVV ELIDPSMGDH
     PPIEQMLKCI HIGLLCVQKK PASRPTISSV NIMLSSNTVR LPSLSRPAFC IQEVSASDSS
     NPYSERYPRP RHSGYSDNST VVSSNDLSIT ELVPR
 
 
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