CRR38_ARATH
ID CRR38_ARATH Reviewed; 252 AA.
AC Q9LRJ9; Q84J93; Q84JX5; Q84UG5;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 99.
DE RecName: Full=Cysteine-rich repeat secretory protein 38;
DE Flags: Precursor;
GN Name=CRRSP38; OrderedLocusNames=At3g22060; ORFNames=MZN24.26;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 16-215.
RC STRAIN=cv. Bla-1, cv. Bretagny, cv. Bs-1, cv. Bu-0, cv. Chi-1, cv. Co-1,
RC cv. Gr-3, cv. Hau-0, cv. Jl-1, cv. Kas-1, cv. Kent, and cv. Lisse;
RX PubMed=12618409; DOI=10.1093/genetics/163.2.723;
RA Barrier M., Bustamante C.D., Yu J., Purugganan M.D.;
RT "Selection on rapidly evolving proteins in the Arabidopsis genome.";
RL Genetics 163:723-733(2003).
RN [6]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11402176; DOI=10.1104/pp.126.2.473;
RA Chen Z.;
RT "A superfamily of proteins with novel cysteine-rich repeats.";
RL Plant Physiol. 126:473-476(2001).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the cysteine-rich repeat secretory protein
CC family. {ECO:0000305}.
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DR EMBL; AB028622; BAB01391.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76585.1; -; Genomic_DNA.
DR EMBL; AY034900; AAK59407.1; -; mRNA.
DR EMBL; BT024900; ABD91491.1; -; mRNA.
DR EMBL; AY140430; AAN46194.1; -; Genomic_DNA.
DR EMBL; AY140431; AAN46195.1; -; Genomic_DNA.
DR EMBL; AY140432; AAN46196.1; -; Genomic_DNA.
DR EMBL; AY140433; AAN46197.1; -; Genomic_DNA.
DR EMBL; AY140434; AAN46198.1; -; Genomic_DNA.
DR EMBL; AY140435; AAN46199.1; -; Genomic_DNA.
DR EMBL; AY140436; AAN46200.1; -; Genomic_DNA.
DR EMBL; AY140437; AAN46201.1; -; Genomic_DNA.
DR EMBL; AY140438; AAN46202.1; -; Genomic_DNA.
DR EMBL; AY140439; AAN46203.1; -; Genomic_DNA.
DR EMBL; AY140440; AAN46204.1; -; Genomic_DNA.
DR EMBL; AY140441; AAN46205.1; -; Genomic_DNA.
DR RefSeq; NP_566697.1; NM_113102.4.
DR AlphaFoldDB; Q9LRJ9; -.
DR SMR; Q9LRJ9; -.
DR BioGRID; 7100; 5.
DR IntAct; Q9LRJ9; 5.
DR STRING; 3702.AT3G22060.1; -.
DR PaxDb; Q9LRJ9; -.
DR PRIDE; Q9LRJ9; -.
DR ProteomicsDB; 224412; -.
DR EnsemblPlants; AT3G22060.1; AT3G22060.1; AT3G22060.
DR GeneID; 821768; -.
DR Gramene; AT3G22060.1; AT3G22060.1; AT3G22060.
DR KEGG; ath:AT3G22060; -.
DR Araport; AT3G22060; -.
DR TAIR; locus:2095662; AT3G22060.
DR eggNOG; ENOG502QPWH; Eukaryota.
DR HOGENOM; CLU_000288_35_0_1; -.
DR InParanoid; Q9LRJ9; -.
DR OMA; KRIVWFP; -.
DR OrthoDB; 975067at2759; -.
DR PhylomeDB; Q9LRJ9; -.
DR PRO; PR:Q9LRJ9; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LRJ9; baseline and differential.
DR Genevisible; Q9LRJ9; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0000325; C:plant-type vacuole; HDA:TAIR.
DR GO; GO:0099503; C:secretory vesicle; HDA:TAIR.
DR GO; GO:0009737; P:response to abscisic acid; IEP:TAIR.
DR Gene3D; 3.30.430.20; -; 2.
DR InterPro; IPR002902; GNK2.
DR InterPro; IPR038408; GNK2_sf.
DR Pfam; PF01657; Stress-antifung; 2.
DR PROSITE; PS51473; GNK2; 2.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat; Secreted; Signal.
FT SIGNAL 1..27
FT /evidence="ECO:0000255"
FT CHAIN 28..252
FT /note="Cysteine-rich repeat secretory protein 38"
FT /id="PRO_0000296166"
FT DOMAIN 34..136
FT /note="Gnk2-homologous 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00806"
FT DOMAIN 142..248
FT /note="Gnk2-homologous 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00806"
FT VARIANT 147
FT /note="Y -> S (in strain: cv. Bla-1 and cv. Bu-0)"
FT VARIANT 172
FT /note="T -> A (in strain: cv. Bla-1 and cv. Bu-0)"
FT VARIANT 190
FT /note="N -> I (in strain: cv. Bretagny)"
FT VARIANT 191
FT /note="I -> L (in strain: cv. Bla-1 and cv. Bu-0)"
FT VARIANT 209..210
FT /note="IT -> TA (in strain: cv. Bla-1 and cv. Bu-0)"
SQ SEQUENCE 252 AA; 27864 MW; 6B62C779010F140F CRC64;
MSSLKRIVWF PILAIAIQIL SIHTVLSQSQ NNAFLFHKCS DIEGSFTSKS LYESNLNNLF
SQLSYKVPST GFAASSTGNT PNNVNGLALC RGDASSSDCR SCLETAIPEL RQRCPNNKAG
IVWYDNCLVK YSSTNFFGKI DFENRFYLYN VKNVSDPSTF NSQTKALLTE LTKKATTRDN
QKLFATGEKN IGKNKLYGLV QCTRDLKSIT CKACLNGIIG ELPNCCDGKE GGRVVGGSCN
FRYEIYPFVK TA
