CRYD_DANRE
ID CRYD_DANRE Reviewed; 520 AA.
AC Q4KML2; Q75WS5;
DT 16-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 16-MAY-2006, sequence version 2.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Cryptochrome DASH;
DE AltName: Full=Protein CRY-DASH;
DE Short=zCRY-DASH;
GN Name=cry-dash;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND COFACTOR.
RX PubMed=15147276; DOI=10.1111/j.1356-9597.2004.00738.x;
RA Daiyasu H., Ishikawa T., Kuma K., Iwai S., Todo T., Toh H.;
RT "Identification of cryptochrome DASH from vertebrates.";
RL Genes Cells 9:479-495(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Ovary;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May have a photoreceptor function (By similarity). Has weak
CC cyclobutyl pyrimidine photolyase activity when expressed in E.coli and
CC when tested in vitro. {ECO:0000250, ECO:0000269|PubMed:15147276}.
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000269|PubMed:15147276};
CC Note=Binds 1 FAD per subunit. {ECO:0000269|PubMed:15147276};
CC -!- COFACTOR:
CC Name=(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate;
CC Xref=ChEBI:CHEBI:15636; Evidence={ECO:0000269|PubMed:15147276};
CC Note=Binds 1 5,10-methenyltetrahydrofolate (MTHF) non-covalently per
CC subunit. {ECO:0000269|PubMed:15147276};
CC -!- SIMILARITY: Belongs to the DNA photolyase class-1 family.
CC {ECO:0000305}.
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DR EMBL; AB120759; BAD08600.1; -; mRNA.
DR EMBL; BC098514; AAH98514.1; -; mRNA.
DR RefSeq; NP_991249.1; NM_205686.1.
DR AlphaFoldDB; Q4KML2; -.
DR SMR; Q4KML2; -.
DR STRING; 7955.ENSDARP00000121988; -.
DR PaxDb; Q4KML2; -.
DR GeneID; 402986; -.
DR KEGG; dre:402986; -.
DR CTD; 402986; -.
DR ZFIN; ZDB-GENE-040617-2; cry-dash.
DR eggNOG; KOG0133; Eukaryota.
DR InParanoid; Q4KML2; -.
DR OrthoDB; 378952at2759; -.
DR PhylomeDB; Q4KML2; -.
DR PRO; PR:Q4KML2; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0003684; F:damaged DNA binding; IDA:ZFIN.
DR GO; GO:0003904; F:deoxyribodipyrimidine photo-lyase activity; IDA:ZFIN.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0071949; F:FAD binding; IBA:GO_Central.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IDA:ZFIN.
DR GO; GO:0000719; P:photoreactive repair; IDA:ZFIN.
DR Gene3D; 3.40.50.620; -; 1.
DR InterPro; IPR014133; Cry_DASH.
DR InterPro; IPR036134; Crypto/Photolyase_FAD-like_sf.
DR InterPro; IPR036155; Crypto/Photolyase_N_sf.
DR InterPro; IPR005101; Cryptochr/Photolyase_FAD-bd.
DR InterPro; IPR002081; Cryptochrome/DNA_photolyase_1.
DR InterPro; IPR006050; DNA_photolyase_N.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR PANTHER; PTHR11455; PTHR11455; 1.
DR Pfam; PF00875; DNA_photolyase; 1.
DR Pfam; PF03441; FAD_binding_7; 1.
DR PRINTS; PR00147; DNAPHOTLYASE.
DR SUPFAM; SSF48173; SSF48173; 1.
DR SUPFAM; SSF52425; SSF52425; 1.
DR TIGRFAMs; TIGR02765; crypto_DASH; 1.
DR PROSITE; PS51645; PHR_CRY_ALPHA_BETA; 1.
PE 2: Evidence at transcript level;
KW Chromophore; FAD; Flavoprotein; Reference proteome.
FT CHAIN 1..520
FT /note="Cryptochrome DASH"
FT /id="PRO_0000235316"
FT DOMAIN 5..141
FT /note="Photolyase/cryptochrome alpha/beta"
FT REGION 479..504
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 479..498
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 38
FT /note="C -> S (in Ref. 2; AAH98514)"
FT /evidence="ECO:0000305"
FT CONFLICT 93
FT /note="C -> F (in Ref. 2; AAH98514)"
FT /evidence="ECO:0000305"
FT CONFLICT 324
FT /note="N -> K (in Ref. 1; BAD08600)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 520 AA; 59922 MW; 1CFAE97F9C1A7213 CRC64;
MSASRTVICL LRNDLRLHDN EVFHWAQRNA EHIIPLYCFD PRHYQGTYHY NFPKTGPFRL
RFLLDSVKDL RALLKKHGST LLVRQGKPED VVCELIKQLG SVSTVAFHEE VASEEKSVEE
KLKEICCQNK VRVQTFWGST LYHRDDLPFS HIGGLPDVYT QFRKAVEAQG RVRPVLSTPE
QVKSPPSGLE EGPIPTFDSL GQTEPLDDCR SAFPCRGGET EALARLKHYF WDTNAVATYK
ETRNGMIGVD FSTKFSPWLA LGCISPRYIY EQIKKYEVER TANQSTYWVI FELLWRDYFK
FVALKYGNRI FYMNGLQDKH VPWNTDMKMF DAWKEGRTGV PFVDANMREL ALTGFMSNRG
RQNVASFLTK DLGLDWRLGA EWFEYLLVDH DVCSNYGNWL YSAGIGNDPR ENRKFNMIKQ
GLDYDNNGDY VRQWVPELRG IKGGDVHTPW TLSNSALSHA QVSLNQTYPC PIITAPEWSR
HVNNKSSGPS SSKGRKGSSY TARQHKDRGI DFYFSKNKHF