CS054_HUMAN
ID CS054_HUMAN Reviewed; 351 AA.
AC Q5BKX5; A8MSZ5; B4DNU7;
DT 21-AUG-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-OCT-2010, sequence version 2.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=UPF0692 protein C19orf54;
GN Name=C19orf54;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC TISSUE=Lung;
RX PubMed=14702039; DOI=10.1038/ng1285;
RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H.,
RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M.,
RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K.,
RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T.,
RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M.,
RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S.,
RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H.,
RA Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K.,
RA Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N.,
RA Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y.,
RA Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K.,
RA Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T.,
RA Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T.,
RA Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y.,
RA Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H.,
RA Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y.,
RA Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H.,
RA Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O.,
RA Isogai T., Sugano S.;
RT "Complete sequencing and characterization of 21,243 full-length human
RT cDNAs.";
RL Nat. Genet. 36:40-45(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15057824; DOI=10.1038/nature02399;
RA Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E.,
RA Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A.,
RA Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S.,
RA Carrano A.V., Caoile C., Chan Y.M., Christensen M., Cleland C.A.,
RA Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J.,
RA Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M.,
RA Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W.,
RA Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V.,
RA Leem S.-H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D.,
RA McCready P.M., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I.,
RA Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L.,
RA Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A.,
RA She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M.,
RA Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J.,
RA Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E.,
RA Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M.,
RA Rubin E.M., Lucas S.M.;
RT "The DNA sequence and biology of human chromosome 19.";
RL Nature 428:529-535(2004).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 3).
RC TISSUE=Melanoma, and Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [4]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-316, AND IDENTIFICATION BY
RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC TISSUE=Cervix carcinoma;
RX PubMed=18669648; DOI=10.1073/pnas.0805139105;
RA Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,
RA Elledge S.J., Gygi S.P.;
RT "A quantitative atlas of mitotic phosphorylation.";
RL Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
RN [5]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-316, AND IDENTIFICATION BY
RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC TISSUE=Cervix carcinoma;
RX PubMed=20068231; DOI=10.1126/scisignal.2000475;
RA Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L.,
RA Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.;
RT "Quantitative phosphoproteomics reveals widespread full phosphorylation
RT site occupancy during mitosis.";
RL Sci. Signal. 3:RA3-RA3(2010).
RN [6]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-316, AND IDENTIFICATION BY
RP MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC TISSUE=Cervix carcinoma, and Erythroleukemia;
RX PubMed=23186163; DOI=10.1021/pr300630k;
RA Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J.,
RA Mohammed S.;
RT "Toward a comprehensive characterization of a human cancer cell
RT phosphoproteome.";
RL J. Proteome Res. 12:260-271(2013).
CC -!- INTERACTION:
CC Q5BKX5-3; Q9NQ94: A1CF; NbExp=3; IntAct=EBI-11976299, EBI-2809489;
CC Q5BKX5-3; Q9NYB9-2: ABI2; NbExp=5; IntAct=EBI-11976299, EBI-11096309;
CC Q5BKX5-3; P21549: AGXT; NbExp=3; IntAct=EBI-11976299, EBI-727098;
CC Q5BKX5-3; Q49AR9: ANKS1A; NbExp=3; IntAct=EBI-11976299, EBI-11954519;
CC Q5BKX5-3; Q03989: ARID5A; NbExp=3; IntAct=EBI-11976299, EBI-948603;
CC Q5BKX5-3; P27658: COL8A1; NbExp=3; IntAct=EBI-11976299, EBI-747133;
CC Q5BKX5-3; A8MQ03: CYSRT1; NbExp=3; IntAct=EBI-11976299, EBI-3867333;
CC Q5BKX5-3; Q86UW9: DTX2; NbExp=3; IntAct=EBI-11976299, EBI-740376;
CC Q5BKX5-3; Q9H0I2: ENKD1; NbExp=3; IntAct=EBI-11976299, EBI-744099;
CC Q5BKX5-3; Q8WU58: FAM222B; NbExp=3; IntAct=EBI-11976299, EBI-2807642;
CC Q5BKX5-3; Q9NW38: FANCL; NbExp=3; IntAct=EBI-11976299, EBI-2339898;
CC Q5BKX5-3; Q8WUP2: FBLIM1; NbExp=3; IntAct=EBI-11976299, EBI-3864120;
CC Q5BKX5-3; Q53EP0-3: FNDC3B; NbExp=3; IntAct=EBI-11976299, EBI-10242151;
CC Q5BKX5-3; O75593: FOXH1; NbExp=3; IntAct=EBI-11976299, EBI-1759806;
CC Q5BKX5-3; O43559: FRS3; NbExp=3; IntAct=EBI-11976299, EBI-725515;
CC Q5BKX5-3; Q9BZE0: GLIS2; NbExp=5; IntAct=EBI-11976299, EBI-7251368;
CC Q5BKX5-3; Q8IVS8: GLYCTK; NbExp=3; IntAct=EBI-11976299, EBI-748515;
CC Q5BKX5-3; Q13227: GPS2; NbExp=3; IntAct=EBI-11976299, EBI-713355;
CC Q5BKX5-3; P31273: HOXC8; NbExp=3; IntAct=EBI-11976299, EBI-1752118;
CC Q5BKX5-3; O43593: HR; NbExp=3; IntAct=EBI-11976299, EBI-2880706;
CC Q5BKX5-3; Q9ULV5-2: HSF4; NbExp=3; IntAct=EBI-11976299, EBI-12056251;
CC Q5BKX5-3; Q86VF2-5: IGFN1; NbExp=3; IntAct=EBI-11976299, EBI-11955401;
CC Q5BKX5-3; Q0VD86: INCA1; NbExp=3; IntAct=EBI-11976299, EBI-6509505;
CC Q5BKX5-3; Q7L273: KCTD9; NbExp=3; IntAct=EBI-11976299, EBI-4397613;
CC Q5BKX5-3; Q5T749: KPRP; NbExp=3; IntAct=EBI-11976299, EBI-10981970;
CC Q5BKX5-3; A1A580: KRTAP23-1; NbExp=3; IntAct=EBI-11976299, EBI-10171734;
CC Q5BKX5-3; Q6PEX3: KRTAP26-1; NbExp=3; IntAct=EBI-11976299, EBI-3957672;
CC Q5BKX5-3; Q14847-2: LASP1; NbExp=3; IntAct=EBI-11976299, EBI-9088686;
CC Q5BKX5-3; Q8TAP4-4: LMO3; NbExp=3; IntAct=EBI-11976299, EBI-11742507;
CC Q5BKX5-3; Q8IVT2: MISP; NbExp=3; IntAct=EBI-11976299, EBI-2555085;
CC Q5BKX5-3; Q14511-2: NEDD9; NbExp=3; IntAct=EBI-11976299, EBI-11746523;
CC Q5BKX5-3; Q86UR1-2: NOXA1; NbExp=5; IntAct=EBI-11976299, EBI-12025760;
CC Q5BKX5-3; Q9HBE1-4: PATZ1; NbExp=3; IntAct=EBI-11976299, EBI-11022007;
CC Q5BKX5-3; P78337: PITX1; NbExp=3; IntAct=EBI-11976299, EBI-748265;
CC Q5BKX5-3; Q9NRY6: PLSCR3; NbExp=3; IntAct=EBI-11976299, EBI-750734;
CC Q5BKX5-3; Q7Z3K3: POGZ; NbExp=3; IntAct=EBI-11976299, EBI-1389308;
CC Q5BKX5-3; O43741: PRKAB2; NbExp=3; IntAct=EBI-11976299, EBI-1053424;
CC Q5BKX5-3; O75360: PROP1; NbExp=3; IntAct=EBI-11976299, EBI-9027467;
CC Q5BKX5-3; P0CG20: PRR35; NbExp=3; IntAct=EBI-11976299, EBI-11986293;
CC Q5BKX5-3; Q2TAL8: QRICH1; NbExp=3; IntAct=EBI-11976299, EBI-2798044;
CC Q5BKX5-3; Q93062-3: RBPMS; NbExp=3; IntAct=EBI-11976299, EBI-740343;
CC Q5BKX5-3; Q6ZRY4: RBPMS2; NbExp=3; IntAct=EBI-11976299, EBI-11987469;
CC Q5BKX5-3; Q01974: ROR2; NbExp=3; IntAct=EBI-11976299, EBI-6422642;
CC Q5BKX5-3; Q8IYX7: SAXO1; NbExp=3; IntAct=EBI-11976299, EBI-3957636;
CC Q5BKX5-3; Q96GM5: SMARCD1; NbExp=3; IntAct=EBI-11976299, EBI-358489;
CC Q5BKX5-3; P09234: SNRPC; NbExp=3; IntAct=EBI-11976299, EBI-766589;
CC Q5BKX5-3; Q99932-2: SPAG8; NbExp=4; IntAct=EBI-11976299, EBI-11959123;
CC Q5BKX5-3; O95947: TBX6; NbExp=3; IntAct=EBI-11976299, EBI-2824328;
CC Q5BKX5-3; O15273: TCAP; NbExp=3; IntAct=EBI-11976299, EBI-954089;
CC Q5BKX5-3; Q9NQB0-10: TCF7L2; NbExp=3; IntAct=EBI-11976299, EBI-11746252;
CC Q5BKX5-3; Q96M29: TEKT5; NbExp=3; IntAct=EBI-11976299, EBI-10239812;
CC Q5BKX5-3; Q92734: TFG; NbExp=3; IntAct=EBI-11976299, EBI-357061;
CC Q5BKX5-3; Q08117-2: TLE5; NbExp=3; IntAct=EBI-11976299, EBI-11741437;
CC Q5BKX5-3; O43711: TLX3; NbExp=3; IntAct=EBI-11976299, EBI-3939165;
CC Q5BKX5-3; Q9H0E2: TOLLIP; NbExp=3; IntAct=EBI-11976299, EBI-74615;
CC Q5BKX5-3; Q9BUZ4: TRAF4; NbExp=3; IntAct=EBI-11976299, EBI-3650647;
CC Q5BKX5-3; Q15645: TRIP13; NbExp=3; IntAct=EBI-11976299, EBI-358993;
CC Q5BKX5-3; Q12815: TROAP; NbExp=3; IntAct=EBI-11976299, EBI-2349743;
CC Q5BKX5-3; Q08AM6: VAC14; NbExp=3; IntAct=EBI-11976299, EBI-2107455;
CC Q5BKX5-3; O95231: VENTX; NbExp=3; IntAct=EBI-11976299, EBI-10191303;
CC Q5BKX5-3; Q64LD2-2: WDR25; NbExp=3; IntAct=EBI-11976299, EBI-12032042;
CC Q5BKX5-3; Q9NZC7-5: WWOX; NbExp=3; IntAct=EBI-11976299, EBI-12040603;
CC Q5BKX5-3; Q53FD0-2: ZC2HC1C; NbExp=3; IntAct=EBI-11976299, EBI-14104088;
CC Q5BKX5-3; Q96K80: ZC3H10; NbExp=3; IntAct=EBI-11976299, EBI-742550;
CC Q5BKX5-3; Q96E35: ZMYND19; NbExp=3; IntAct=EBI-11976299, EBI-746595;
CC Q5BKX5-3; Q96EJ4; NbExp=3; IntAct=EBI-11976299, EBI-750454;
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=3;
CC Name=1;
CC IsoId=Q5BKX5-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q5BKX5-2; Sequence=VSP_039884, VSP_039885;
CC Name=3;
CC IsoId=Q5BKX5-3; Sequence=VSP_039884;
CC -!- SIMILARITY: Belongs to the UPF0692 family. {ECO:0000305}.
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DR EMBL; AK298068; BAG60359.1; -; mRNA.
DR EMBL; AC020945; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC020262; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; BC090894; AAH90894.1; -; mRNA.
DR CCDS; CCDS12564.2; -. [Q5BKX5-1]
DR RefSeq; NP_940878.3; NM_198476.3. [Q5BKX5-1]
DR RefSeq; XP_005258835.1; XM_005258778.4.
DR RefSeq; XP_016882116.1; XM_017026627.1.
DR AlphaFoldDB; Q5BKX5; -.
DR BioGRID; 129828; 78.
DR IntAct; Q5BKX5; 70.
DR STRING; 9606.ENSP00000367564; -.
DR iPTMnet; Q5BKX5; -.
DR PhosphoSitePlus; Q5BKX5; -.
DR BioMuta; C19orf54; -.
DR DMDM; 308153429; -.
DR EPD; Q5BKX5; -.
DR jPOST; Q5BKX5; -.
DR MassIVE; Q5BKX5; -.
DR MaxQB; Q5BKX5; -.
DR PaxDb; Q5BKX5; -.
DR PeptideAtlas; Q5BKX5; -.
DR PRIDE; Q5BKX5; -.
DR ProteomicsDB; 62702; -. [Q5BKX5-1]
DR ProteomicsDB; 62703; -. [Q5BKX5-2]
DR ProteomicsDB; 62704; -. [Q5BKX5-3]
DR Antibodypedia; 45214; 70 antibodies from 14 providers.
DR DNASU; 284325; -.
DR Ensembl; ENST00000378313.7; ENSP00000367564.2; ENSG00000188493.15. [Q5BKX5-1]
DR GeneID; 284325; -.
DR KEGG; hsa:284325; -.
DR MANE-Select; ENST00000378313.7; ENSP00000367564.2; NM_198476.5; NP_940878.3.
DR UCSC; uc002oou.1; human. [Q5BKX5-1]
DR CTD; 284325; -.
DR DisGeNET; 284325; -.
DR GeneCards; C19orf54; -.
DR HGNC; HGNC:24758; C19orf54.
DR HPA; ENSG00000188493; Low tissue specificity.
DR neXtProt; NX_Q5BKX5; -.
DR OpenTargets; ENSG00000188493; -.
DR PharmGKB; PA147358417; -.
DR VEuPathDB; HostDB:ENSG00000188493; -.
DR eggNOG; ENOG502QQQD; Eukaryota.
DR GeneTree; ENSGT00390000012368; -.
DR HOGENOM; CLU_077492_1_0_1; -.
DR InParanoid; Q5BKX5; -.
DR OMA; VCGCKAE; -.
DR OrthoDB; 1549432at2759; -.
DR PhylomeDB; Q5BKX5; -.
DR TreeFam; TF314051; -.
DR PathwayCommons; Q5BKX5; -.
DR SignaLink; Q5BKX5; -.
DR BioGRID-ORCS; 284325; 13 hits in 1050 CRISPR screens.
DR GenomeRNAi; 284325; -.
DR Pharos; Q5BKX5; Tdark.
DR PRO; PR:Q5BKX5; -.
DR Proteomes; UP000005640; Chromosome 19.
DR RNAct; Q5BKX5; protein.
DR Bgee; ENSG00000188493; Expressed in pancreatic ductal cell and 184 other tissues.
DR ExpressionAtlas; Q5BKX5; baseline and differential.
DR Genevisible; Q5BKX5; HS.
DR InterPro; IPR040043; UPF0692.
DR PANTHER; PTHR28631; PTHR28631; 1.
PE 1: Evidence at protein level;
KW Alternative splicing; Phosphoprotein; Reference proteome.
FT CHAIN 1..351
FT /note="UPF0692 protein C19orf54"
FT /id="PRO_0000297659"
FT REGION 1..70
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..67
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 316
FT /note="Phosphoserine"
FT /evidence="ECO:0007744|PubMed:18669648,
FT ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163"
FT VAR_SEQ 1..216
FT /note="MTSPCSPPLKPPISPPKTPVPQASSIPSPPLPPSPLDFSALPSPPWSQQTPV
FT PPPLPLPPPPAATGPAPRHVFGLEKSQLLKEAFDKAGPVPKGREDVKRLLKLHKDRFRG
FT DLRWILFCADLPSLIQEGPQCGLVALWMAGTLLSPPSGVPLERLIRVATERGYTAQGEM
FT FSVADMGRLAQEVLGCQAKLLSGGLGGPNRDLVLQHLVTGHPLLIP -> MRAGGLVDG
FT RYSPVAPQWRPPGETHTGGHGKRLHGPGRDVLSTS (in isoform 2 and
FT isoform 3)"
FT /evidence="ECO:0000303|PubMed:14702039,
FT ECO:0000303|PubMed:15489334"
FT /id="VSP_039884"
FT VAR_SEQ 305..351
FT /note="VRESNLQLTDFSPSRATDGRVYVVPVGGVRAGLCGQALLLTPQDCSH -> G
FT PPLSSH (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:14702039"
FT /id="VSP_039885"
FT CONFLICT 70
FT /note="R -> P (in Ref. 3; BC020262)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 351 AA; 37779 MW; B1CE78515DC3A553 CRC64;
MTSPCSPPLK PPISPPKTPV PQASSIPSPP LPPSPLDFSA LPSPPWSQQT PVPPPLPLPP
PPAATGPAPR HVFGLEKSQL LKEAFDKAGP VPKGREDVKR LLKLHKDRFR GDLRWILFCA
DLPSLIQEGP QCGLVALWMA GTLLSPPSGV PLERLIRVAT ERGYTAQGEM FSVADMGRLA
QEVLGCQAKL LSGGLGGPNR DLVLQHLVTG HPLLIPYDED FNHEPCQRKG HKAHWAVSAG
VLLGVRAVPS LGYTEDPELP GLFHPVLGTP CQPPSLPEEG SPGAVYLLSK QGKSWHYQLW
DYDQVRESNL QLTDFSPSRA TDGRVYVVPV GGVRAGLCGQ ALLLTPQDCS H
