CSCL6_ARATH
ID CSCL6_ARATH Reviewed; 778 AA.
AC F4HYR3; Q9MAV5;
DT 09-JUL-2014, integrated into UniProtKB/Swiss-Prot.
DT 09-JUL-2014, sequence version 2.
DT 03-AUG-2022, entry version 63.
DE RecName: Full=CSC1-like protein At1g62320;
GN OrderedLocusNames=At1g62320; ORFNames=F24O1.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=24503647; DOI=10.1038/cr.2014.14;
RA Hou C., Tian W., Kleist T., He K., Garcia V., Bai F., Hao Y., Luan S.,
RA Li L.;
RT "DUF221 proteins are a family of osmosensitive calcium-permeable cation
RT channels conserved across eukaryotes.";
RL Cell Res. 24:632-635(2014).
CC -!- FUNCTION: Acts as an osmosensitive calcium-permeable cation channel.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the CSC1 (TC 1.A.17) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AEE33953.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC003113; AAF70851.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33953.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; ANM61021.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM61023.1; -; Genomic_DNA.
DR PIR; H96649; H96649.
DR PIR; T01441; T01441.
DR RefSeq; NP_001319293.1; NM_001334028.1.
DR RefSeq; NP_001323266.1; NM_001334030.1.
DR RefSeq; NP_001323268.1; NM_001334032.1.
DR AlphaFoldDB; F4HYR3; -.
DR SMR; F4HYR3; -.
DR BioGRID; 27751; 2.
DR IntAct; F4HYR3; 2.
DR STRING; 3702.AT1G62320.1; -.
DR PaxDb; F4HYR3; -.
DR PRIDE; F4HYR3; -.
DR ProteomicsDB; 220349; -.
DR EnsemblPlants; AT1G62320.3; AT1G62320.3; AT1G62320.
DR EnsemblPlants; AT1G62320.5; AT1G62320.5; AT1G62320.
DR GeneID; 842530; -.
DR Gramene; AT1G62320.3; AT1G62320.3; AT1G62320.
DR Gramene; AT1G62320.5; AT1G62320.5; AT1G62320.
DR KEGG; ath:AT1G62320; -.
DR Araport; AT1G62320; -.
DR TAIR; locus:2027119; AT1G62320.
DR eggNOG; KOG1134; Eukaryota.
DR InParanoid; F4HYR3; -.
DR OMA; YYKYALK; -.
DR OrthoDB; 186546at2759; -.
DR PhylomeDB; F4HYR3; -.
DR PRO; PR:F4HYR3; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; F4HYR3; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0005227; F:calcium activated cation channel activity; IBA:GO_Central.
DR InterPro; IPR045122; Csc1-like.
DR InterPro; IPR032880; Csc1_N.
DR InterPro; IPR027815; PHM7_cyt.
DR InterPro; IPR003864; RSN1_7TM.
DR PANTHER; PTHR13018; PTHR13018; 1.
DR Pfam; PF14703; PHM7_cyt; 1.
DR Pfam; PF02714; RSN1_7TM; 1.
DR Pfam; PF13967; RSN1_TM; 1.
PE 3: Inferred from homology;
KW Calcium; Ion channel; Ion transport; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..778
FT /note="CSC1-like protein At1g62320"
FT /id="PRO_0000429804"
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 101..121
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 158..178
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 375..395
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 427..447
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 467..487
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 512..532
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 584..604
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 626..646
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 651..671
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 738..778
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 743..769
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 778 AA; 89309 MW; 52533674565B3E95 CRC64;
MATLADIGLA AAINILSALI FLLLFAILRI QPFNDRVYFP KWYLKGVRSS PVNSGAFVSK
IMNLDFRSYV RFLNWMPDAL KMPEPELIDH AGLDSAVYLR IYLIGLKIFG PIALLSWSIL
VPVNWTSDGL QLAKLRNVTS SNIDKLSISN VERGSDRFWA HLVMAYAFTF WTCYVLMKEY
EKIAAMRLSF LQSEKRRADQ FTVLVRNVPP DSDESISENV QHFFLVNHPD HYLTHQVVYN
ANELAKLVED KKKMQNWLDY YQLKYTRNKE QRPRVKMGFL GLWGKKVDAM DHYTAEIEKL
SEQIMEERKR IKKDDKSVMQ AAFVSFKTRW GAAVCAQTQQ TKNPTEWLTE WAPEAREMYW
PNLAMPYVSL TVRRFVMHIA FFFLTFFFII PIAFVQSLAS IEGIEKSAPF LSPIVKNKLM
KSLIQGFLPG IVLKLFLIFL PTILMIMSKF EGFISISSLE RRAAFRYYIF NLVNVFLGSV
ITGSAFEQLD SFLKQSANDI PRTVGVAIPI KATFFITYIM VDGWAGVAGE IFRLKPLVIF
HLKNFFFVKT EKDREEAMDP GQIDFYATEP RIQLYFLLGL VYAPVTPVLL PFIIFFFGFA
YLVFRHQIIN VYNQKYESAG AFWPDVHGRI ISALIISQIL LLGLMSTKGK VQSTPFLLVL
AILTFGFHRF CKGRYESAFV INPLQEAMIK DTLERAREPN LNLKGFLQNA YVHPVFKDEE
DSDEEGLIED SDDEDCVVVQ TKRQRSRRTT VASSNASRGS SQSTPFNQLD LGKGKPET