CSCL7_ARATH
ID CSCL7_ARATH Reviewed; 771 AA.
AC B5TYT3; O65383;
DT 09-JUL-2014, integrated into UniProtKB/Swiss-Prot.
DT 04-NOV-2008, sequence version 1.
DT 25-MAY-2022, entry version 82.
DE RecName: Full=CSC1-like protein At1g11960;
GN OrderedLocusNames=At1g11960; ORFNames=F12F1.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia; TISSUE=Seedling;
RA Tanaka K., Stacey G.;
RT "Arabidopsis stress-inducible genes encoding membrane proteins.";
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP GENE FAMILY.
RX PubMed=24503647; DOI=10.1038/cr.2014.14;
RA Hou C., Tian W., Kleist T., He K., Garcia V., Bai F., Hao Y., Luan S.,
RA Li L.;
RT "DUF221 proteins are a family of osmosensitive calcium-permeable cation
RT channels conserved across eukaryotes.";
RL Cell Res. 24:632-635(2014).
CC -!- FUNCTION: Acts as an osmosensitive calcium-permeable cation channel.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the CSC1 (TC 1.A.17) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC17615.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; FJ041116; ACI01072.1; -; mRNA.
DR EMBL; AC002131; AAC17615.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE28821.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM58257.1; -; Genomic_DNA.
DR PIR; E86254; E86254.
DR RefSeq; NP_001320706.1; NM_001332015.1.
DR RefSeq; NP_172660.5; NM_101068.6.
DR AlphaFoldDB; B5TYT3; -.
DR SMR; B5TYT3; -.
DR STRING; 3702.AT1G11960.1; -.
DR iPTMnet; B5TYT3; -.
DR PaxDb; B5TYT3; -.
DR PRIDE; B5TYT3; -.
DR ProteomicsDB; 222770; -.
DR EnsemblPlants; AT1G11960.1; AT1G11960.1; AT1G11960.
DR EnsemblPlants; AT1G11960.3; AT1G11960.3; AT1G11960.
DR GeneID; 837748; -.
DR Gramene; AT1G11960.1; AT1G11960.1; AT1G11960.
DR Gramene; AT1G11960.3; AT1G11960.3; AT1G11960.
DR KEGG; ath:AT1G11960; -.
DR Araport; AT1G11960; -.
DR TAIR; locus:2008860; AT1G11960.
DR eggNOG; KOG1134; Eukaryota.
DR HOGENOM; CLU_002458_7_1_1; -.
DR InParanoid; B5TYT3; -.
DR OMA; NDYEDSR; -.
DR OrthoDB; 395194at2759; -.
DR PhylomeDB; B5TYT3; -.
DR PRO; PR:B5TYT3; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; B5TYT3; baseline and differential.
DR Genevisible; B5TYT3; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:TAIR.
DR GO; GO:0005227; F:calcium activated cation channel activity; IBA:GO_Central.
DR GO; GO:0005262; F:calcium channel activity; IGI:TAIR.
DR GO; GO:0140426; P:PAMP-triggered immunity signalling pathway; IGI:TAIR.
DR GO; GO:0010118; P:stomatal movement; IMP:TAIR.
DR InterPro; IPR045122; Csc1-like.
DR InterPro; IPR032880; Csc1_N.
DR InterPro; IPR027815; PHM7_cyt.
DR InterPro; IPR003864; RSN1_7TM.
DR PANTHER; PTHR13018; PTHR13018; 1.
DR Pfam; PF14703; PHM7_cyt; 1.
DR Pfam; PF02714; RSN1_7TM; 1.
DR Pfam; PF13967; RSN1_TM; 1.
PE 2: Evidence at transcript level;
KW Calcium; Ion channel; Ion transport; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..771
FT /note="CSC1-like protein At1g11960"
FT /id="PRO_0000429805"
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 101..121
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 158..178
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 375..395
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 427..447
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 467..487
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 512..532
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 584..604
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 630..650
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 651..671
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 744..771
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 746..771
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 771 AA; 88280 MW; 889182EC966964D6 CRC64;
MATLGDIGVA AAINILTAII FLLAFAILRI QPFNDRVYFP KWYLKGIRSS PLHSGALVSK
FVNVNLGSYL RFLNWMPAAL KMPEPELIDH AGLDSAVYLR IYLIGLKIFV PIALLAWSIL
VPVNWTSHGL QLAKLRNVTS SDIDKLSISN IENGSDRFWT HLVMAYAFTF WTCYVLMKEY
EKVAAMRLAF LQNEQRRPDQ FTVLVRNVPA DPDESISDSV EHFFLVNHPD HYLTHQVVYN
ANDLAALVEQ KKSTQNWLDY YQLKYTRNQE HKPRIKTGFL GLWGKKVDAI DHYIAEIEKL
NEQIMEERKK VKKDDTSVMP AAFVSFKTRW GAAVSAQTQQ SSDPTEWLTE WAPEAREVFW
SNLAIPYVSL TVRRLIMHIA FFFLTFFFMI PIAFVQSLAS IEGIEKNAPF LKSIIENDLF
KSVIQGFLPG IVLKLFLIFL PSILMVMSKF EGFVSLSSLE RRAAFRYYIF NLINVFLGSV
ITGSAFEQLD SFLKQSAKEI PKTVGVAIPI KATFFITYIM VDGWAGIAGE ILRLKPLIFF
HIKNSLLVKT EKDREEAMNP GQINYHATEP RIQLYFLLGL VYAPVTPVLL PFIIIFFALA
YLVFRHQIIN VYNQEYESAA RFWPDVHGRI ISALIIAQIL LMGLLSTKGA AQSTPFLLFL
PIITFFFHRY CKGRYEPAFL RHPLKEAMVK DTLERAREPN FNLKPYLQKA YIHPVFKDND
YEDSRFDEIS GYCIEDSDEE CVTVPTKRQS RINTPAVSHA SRGSSRSPPS K