CSCL8_ARATH
ID CSCL8_ARATH Reviewed; 712 AA.
AC F4JCY2; Q9M1H6;
DT 09-JUL-2014, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 03-AUG-2022, entry version 65.
DE RecName: Full=CSC1-like protein At3g54510;
GN OrderedLocusNames=At3g54510; ORFNames=T14E10_80;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=24503647; DOI=10.1038/cr.2014.14;
RA Hou C., Tian W., Kleist T., He K., Garcia V., Bai F., Hao Y., Luan S.,
RA Li L.;
RT "DUF221 proteins are a family of osmosensitive calcium-permeable cation
RT channels conserved across eukaryotes.";
RL Cell Res. 24:632-635(2014).
CC -!- FUNCTION: Acts as an osmosensitive calcium-permeable cation channel.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=F4JCY2-1; Sequence=Displayed;
CC -!- SIMILARITY: Belongs to the CSC1 (TC 1.A.17) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB77571.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL138656; CAB77571.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE79244.1; -; Genomic_DNA.
DR PIR; T47610; T47610.
DR RefSeq; NP_001118837.1; NM_001125365.2. [F4JCY2-1]
DR AlphaFoldDB; F4JCY2; -.
DR SMR; F4JCY2; -.
DR STRING; 3702.AT3G54510.2; -.
DR iPTMnet; F4JCY2; -.
DR PaxDb; F4JCY2; -.
DR PRIDE; F4JCY2; -.
DR ProteomicsDB; 222771; -. [F4JCY2-1]
DR EnsemblPlants; AT3G54510.2; AT3G54510.2; AT3G54510. [F4JCY2-1]
DR GeneID; 824616; -.
DR Gramene; AT3G54510.2; AT3G54510.2; AT3G54510. [F4JCY2-1]
DR KEGG; ath:AT3G54510; -.
DR Araport; AT3G54510; -.
DR TAIR; locus:2096991; AT3G54510.
DR eggNOG; KOG1134; Eukaryota.
DR HOGENOM; CLU_002458_7_1_1; -.
DR InParanoid; F4JCY2; -.
DR OMA; SAYKPPW; -.
DR PRO; PR:F4JCY2; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; F4JCY2; baseline and differential.
DR Genevisible; F4JCY2; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0005227; F:calcium activated cation channel activity; IBA:GO_Central.
DR InterPro; IPR045122; Csc1-like.
DR InterPro; IPR032880; Csc1_N.
DR InterPro; IPR027815; PHM7_cyt.
DR InterPro; IPR003864; RSN1_7TM.
DR PANTHER; PTHR13018; PTHR13018; 1.
DR Pfam; PF14703; PHM7_cyt; 1.
DR Pfam; PF02714; RSN1_7TM; 1.
DR Pfam; PF13967; RSN1_TM; 1.
PE 3: Inferred from homology;
KW Alternative splicing; Calcium; Ion channel; Ion transport; Membrane;
KW Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..712
FT /note="CSC1-like protein At3g54510"
FT /id="PRO_0000429806"
FT TRANSMEM 6..26
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 94..114
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 146..166
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 351..371
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 407..427
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 442..462
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 494..514
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 546..566
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 597..617
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 623..643
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 712 AA; 81399 MW; 83E3EC2DC0D5B265 CRC64;
MTPESLLASA SINIGLAVVA LWLFSVLKKQ PRNAVVYYAR RLSDRHHHRP LSLHSSLCLP
RFLPSVAWIP RAFRVPEDEI LSRHGLDALV LIRLFKFGIR FFLMCSLLGA SLLLPVDYYN
ESDLPTRREY SMDAFTISNI TRGSNKLWVH FSCLWCISFY ALFLLHKEYK EILVIRLQQM
KELRHRADQF TVLVRQVPLC PEHNTRGCAV DHFFSKHHRF SYHSHQMLYD GRDLEYLLGK
QKKLKKELED KRHTEILSNG SQEHKQISTS EEKLREITHM IYHLQSETML REKELPVAFV
TFKSRRNAAL AAQTQQHSNP LELITEMAPE PRDVSWRNLA IPQKILPLNK IGVILAAALL
TIFFAIPVTA VQGIAKYEKL KKWFPPAMAI EFIPGLSSVV TGYLPSAILK GFMYIIPFAM
LGLAYLGGSI SNSKEEIKAC NMVFYFLMGN VFFLSLISGS LLDEIGEYLT HPRDIPSHLA
AAVSAQAEFF MTYILTDGLS GFSLEILQLG LILFDIIRSY TYGRGKERTP YLFSFPYFRV
IPTVSLSIMI GMIYAVVAPL MLPFLVGYFC LGYIVYFNQM EDVYETTYDT CGRFWPFIHH
YIFVSIILMQ ITMVGLFGLK SKPSAAIATV PLILITIAYN EYCKIRFLPS FKHFPIQTAV
EIDEEDEKNG EMETHYVDAA TAYNRHQPCL ERVSSAESPT NLSQPLLGTD SI