CSG_METFV
ID CSG_METFV Reviewed; 593 AA.
AC P27373; E3GXJ6;
DT 01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1992, sequence version 1.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=Cell surface glycoprotein;
DE AltName: Full=S-layer protein;
DE Flags: Precursor;
GN Name=slgA; OrderedLocusNames=Mfer_0225;
OS Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S).
OC Archaea; Euryarchaeota; Methanomada group; Methanobacteria;
OC Methanobacteriales; Methanothermaceae; Methanothermus.
OX NCBI_TaxID=523846;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 23-42.
RC STRAIN=ATCC 43054 / DSM 2088 / JCM 10308 / V24 S;
RX PubMed=1712296; DOI=10.1111/j.1432-1033.1991.tb16102.x;
RA Broeckl G., Behr M., Fabry S., Hensel R., Kaudewitz H., Biendl E.,
RA Koenig H.;
RT "Analysis and nucleotide sequence of the genes encoding the surface-layer
RT glycoproteins of the hyperthermophilic methanogens Methanothermus fervidus
RT and Methanothermus sociabilis.";
RL Eur. J. Biochem. 199:147-152(1991).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43054 / DSM 2088 / JCM 10308 / V24 S;
RX PubMed=21304736; DOI=10.4056/sigs.1283367;
RA Anderson I., Djao O.D., Misra M., Chertkov O., Nolan M., Lucas S.,
RA Lapidus A., Del Rio T.G., Tice H., Cheng J.F., Tapia R., Han C.,
RA Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K.,
RA Mikhailova N., Pati A., Brambilla E., Chen A., Palaniappan K., Land M.,
RA Hauser L., Chang Y.J., Jeffries C.D., Sikorski J., Spring S., Rohde M.,
RA Eichinger K., Huber H., Wirth R., Goker M., Detter J.C., Woyke T.,
RA Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P.,
RA Kyrpides N.C.;
RT "Complete genome sequence of Methanothermus fervidus type strain (V24S).";
RL Stand. Genomic Sci. 3:315-324(2010).
RN [3]
RP GLYCOSYLATION.
RC STRAIN=ATCC 43054 / DSM 2088 / JCM 10308 / V24 S;
RX PubMed=8262914; DOI=10.1016/s0021-9258(19)74185-4;
RA Karcher U., Schroder H., Haslinger E., Allmaier G., Schreiner R.,
RA Wieland F., Haselbeck A., Konig H.;
RT "Primary structure of the heterosaccharide of the surface glycoprotein of
RT Methanothermus fervidus.";
RL J. Biol. Chem. 268:26821-26826(1993).
CC -!- FUNCTION: The S-layer is a paracrystalline mono-layered assembly of
CC proteins which coat the surface of the cell.
CC -!- SUBCELLULAR LOCATION: Secreted, cell wall, S-layer. Note=This archaea
CC is covered by an S-layer with hexagonal symmetry.
CC -!- PTM: N-glycosylated; contains glycans composed of methyl-Man, Man and
CC GalNAc residues in a molar ratio of 2:3:1.
CC {ECO:0000269|PubMed:8262914}.
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DR EMBL; X58297; CAA41230.1; -; Genomic_DNA.
DR EMBL; CP002278; ADP77028.1; -; Genomic_DNA.
DR PIR; S16225; S16225.
DR RefSeq; WP_013413306.1; NC_014658.1.
DR AlphaFoldDB; P27373; -.
DR SMR; P27373; -.
DR iPTMnet; P27373; -.
DR EnsemblBacteria; ADP77028; ADP77028; Mfer_0225.
DR GeneID; 9961940; -.
DR KEGG; mfv:Mfer_0225; -.
DR HOGENOM; CLU_459779_0_0_2; -.
DR OrthoDB; 82089at2157; -.
DR Proteomes; UP000002315; Chromosome.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0030115; C:S-layer; IEA:UniProtKB-SubCell.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR Gene3D; 2.160.20.10; -; 1.
DR InterPro; IPR006633; Carb-bd_sugar_hydrolysis-dom.
DR InterPro; IPR007742; NosD_dom.
DR InterPro; IPR022441; Para_beta_helix_rpt-2.
DR InterPro; IPR006626; PbH1.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR Pfam; PF05048; NosD; 2.
DR SMART; SM00722; CASH; 2.
DR SMART; SM00710; PbH1; 8.
DR SUPFAM; SSF51126; SSF51126; 1.
DR TIGRFAMs; TIGR03804; para_beta_helix; 1.
PE 1: Evidence at protein level;
KW Cell wall; Cell wall biogenesis/degradation; Direct protein sequencing;
KW Glycoprotein; Reference proteome; S-layer; Secreted; Signal.
FT SIGNAL 1..22
FT /evidence="ECO:0000269|PubMed:1712296"
FT CHAIN 23..593
FT /note="Cell surface glycoprotein"
FT /id="PRO_0000032618"
FT CARBOHYD 29
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000269|PubMed:8262914"
FT CARBOHYD 58
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 66
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 74
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 114
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 122
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 145
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 148
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 158
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 176
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 208
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 231
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 326
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 336
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 340
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 431
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 471
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 500
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 516
FT /note="N-linked (GalNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 593 AA; 65481 MW; E064669967B7611C CRC64;
MRKFTLLMLL LIVISMSGIA GAAEVKNLNT SKTFTKIQEA IDDPSTTDGN IIIVGPGNYT
ENILVNKSLT LKSNGSAIIN AVSSEKSTIT IKANNVWIEG FIIIGGKNGI YMENVTGCTI
TNNTIQNAFV SGWEYYGGNG ICLVNSTNNT ITNNIIRNNT WNGINVCESK GNIIKNNTIM
YSGGIGIYVW GFNKFEGNNI IENNRIINAT YGGIYLFRPS NNKICRNYIA NVSSGGGGMS
GAICIDVSDY NIVKDNIGIN CDGGLFTDGM IGNEITNNIF KNCKVAVSES TYGPASRNNK
IYGNYFINYE TAISDPKGEL VDNIWNTTEG GNYWSNYTGN NTGDGTGNIP YYYDNKPLVV
DLAIEDIAAK PSGIEVRVKN LGKADIKKID PLTKLKIKIS CDNDVYETFI DPLSAGESQI
VRWDKIVPEG NHTIKAEIPY SAEGYLIGTN IRDADISNNV FSKIVQGFVQ NKTFTITLTN
LGKSTITIKY YISIYTNPVN GTKVSYRELT ITLKPNETKT IELGKYPFKY AVSGTMIVKN
PSRYRIPLNL RIKYEIEGLN PQMREISKYI APRGEFRYIA RYTGKEEGYA DVW