CSLA4_ORYSJ
ID CSLA4_ORYSJ Reviewed; 549 AA.
AC Q8S7W0; A0A0P0VTN5; A3AEJ7; B9FBJ8; Q0DUS4; Q10R71; Q7PC74;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=Probable glucomannan 4-beta-mannosyltransferase 4 {ECO:0000305};
DE EC=2.4.1.32 {ECO:0000250|UniProtKB:Q7PC76};
DE AltName: Full=Cellulose synthase-like protein A4 {ECO:0000303|PubMed:11842136};
DE Short=OsCslA4 {ECO:0000303|PubMed:11842136};
DE AltName: Full=Glucomannan synthase {ECO:0000305};
DE AltName: Full=Mannan synthase 4 {ECO:0000305};
GN Name=CSLA4 {ECO:0000303|PubMed:11842136};
GN OrderedLocusNames=Os03g0169500, LOC_Os03g07350;
GN ORFNames=OsJ_009219, OSJNBa0091P11.21;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RG The rice full-length cDNA consortium;
RT "Oryza sativa full length cDNA.";
RL Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases.
RN [7]
RP IDENTIFICATION, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=11842136; DOI=10.1104/pp.010875;
RA Hazen S.P., Scott-Craig J.S., Walton J.D.;
RT "Cellulose synthase-like genes of rice.";
RL Plant Physiol. 128:336-340(2002).
CC -!- FUNCTION: Probable mannan synthase which consists of a 4-beta-
CC mannosyltransferase activity on mannan using GDP-mannose. The beta-1,4-
CC mannan product is the backbone for galactomannan synthesis by
CC galactomannan galactosyltransferase. Galactomannan is a noncellulosic
CC polysaccharides of plant cell wall. {ECO:0000250|UniProtKB:Q7PC76}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=GDP-mannose + (glucomannan)n = GDP + (glucomannan)n+1.;
CC EC=2.4.1.32; Evidence={ECO:0000250|UniProtKB:Q7PC76};
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305}; Multi-
CC pass membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 2 family. Plant
CC cellulose synthase-like A subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ABF94194.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AK287855; Type=Frameshift; Evidence={ECO:0000305};
CC Sequence=BAF11014.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=DAA01745.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=EEE58400.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC073556; AAL84294.1; -; Genomic_DNA.
DR EMBL; DP000009; ABF94194.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008209; BAF11014.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014959; BAS82512.1; -; Genomic_DNA.
DR EMBL; CM000140; EEE58400.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AK287855; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; BK000082; DAA01745.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; XP_015630733.1; XM_015775247.1.
DR AlphaFoldDB; Q8S7W0; -.
DR STRING; 4530.OS03T0169500-01; -.
DR CAZy; GT2; Glycosyltransferase Family 2.
DR PaxDb; Q8S7W0; -.
DR PRIDE; Q8S7W0; -.
DR EnsemblPlants; Os03t0169500-01; Os03t0169500-01; Os03g0169500.
DR GeneID; 4331764; -.
DR Gramene; Os03t0169500-01; Os03t0169500-01; Os03g0169500.
DR KEGG; osa:4331764; -.
DR eggNOG; ENOG502SHF0; Eukaryota.
DR HOGENOM; CLU_012856_2_0_1; -.
DR InParanoid; Q8S7W0; -.
DR OMA; FAVWACM; -.
DR OrthoDB; 559375at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000007752; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR Genevisible; Q8S7W0; OS.
DR GO; GO:0005794; C:Golgi apparatus; IBA:GO_Central.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0047259; F:glucomannan 4-beta-mannosyltransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0016757; F:glycosyltransferase activity; IBA:GO_Central.
DR GO; GO:0051753; F:mannan synthase activity; IBA:GO_Central.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR Gene3D; 3.90.550.10; -; 1.
DR InterPro; IPR001173; Glyco_trans_2-like.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR Pfam; PF13632; Glyco_trans_2_3; 1.
DR SUPFAM; SSF53448; SSF53448; 1.
PE 2: Evidence at transcript level;
KW Cell wall biogenesis/degradation; Glycosyltransferase; Golgi apparatus;
KW Membrane; Reference proteome; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..549
FT /note="Probable glucomannan 4-beta-mannosyltransferase 4"
FT /id="PRO_0000319375"
FT TRANSMEM 35..55
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 383..403
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 406..426
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 497..517
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 523..543
FT /note="Helical"
FT /evidence="ECO:0000255"
FT ACT_SITE 151
FT /evidence="ECO:0000255"
FT ACT_SITE 304
FT /evidence="ECO:0000255"
FT BINDING 210
FT /ligand="substrate"
FT /evidence="ECO:0000255"
FT BINDING 212
FT /ligand="substrate"
FT /evidence="ECO:0000255"
SQ SEQUENCE 549 AA; 61889 MW; 7F3B04BDD14DEA38 CRC64;
MEGQWGRWRL AAAAAASSSG DQIAAAWAVV RARAVAPVLQ FAVWACMAMS VMLVLEVAYM
SLVSLVAVKL LRRVPERRYK WEPITTGSGG VGGGDGEDEE AATGGREAAA FPMVLVQIPM
YNEKEVYKLS IGAACALTWP PDRIIIQVLD DSTDPAIKDL VELECKDWAR KEINIKYEIR
DNRKGYKAGA LKKGMEHIYT QQCDFVAIFD ADFQPESDFL LKTIPFLVHN PKIGLVQTRW
EFVNYDVCLM TRIQKMSLDY HFKVEQESGS SMHSFFGFNG TAGVWRVSAI NEAGGWKDRT
TVEDMDLAVR ASLKGWQFLY VGDIRVKSEL PSTFKAYRHQ QHRWTCGAAN LFRKMATEIA
KNKGVSVWKK LHLLYSFFFV RRVVAPILTF LFYCVVIPLS VMVPEVSIPV WGMVYIPTAI
TIMNAIRNPG SIHLMPFWIL FENVMAMHRM RAALTGLLET MNVNQWVVTE KVGDHVKDKL
EVPLLEPLKP TDCVERIYIP ELMVAFYLLV CASYDLVLGA KHYYLYIYLQ AFAFIALGFG
FAGTSTPCS