CSLC2_ORYSJ
ID CSLC2_ORYSJ Reviewed; 698 AA.
AC Q69L19; A3BZ15; Q0J1M1;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 26-FEB-2008, sequence version 2.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Probable xyloglucan glycosyltransferase 2;
DE EC=2.4.1.-;
DE AltName: Full=Cellulose synthase-like protein C2;
DE AltName: Full=OsCslC2;
GN Name=CSLC2; OrderedLocusNames=Os09g0428000, LOC_Os09g25900;
GN ORFNames=OJ1299_A11.39, OsJ_028287, P0689B09.2;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=11842136; DOI=10.1104/pp.010875;
RA Hazen S.P., Scott-Craig J.S., Walton J.D.;
RT "Cellulose synthase-like genes of rice.";
RL Plant Physiol. 128:336-340(2002).
CC -!- FUNCTION: Probable beta-1,4-glucan synthase rather involved in the
CC synthesis of the xyloglucan backbone than cellulose. Seems to work
CC simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a
CC noncellulosic polysaccharides of plant cell wall and consists of a
CC glucan backbone substituted by xylose, galactose and fucose (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305}; Multi-
CC pass membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 2 family. Plant
CC cellulose synthase-like C subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD33623.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=BAD34098.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=BAF25144.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=CM000146; Type=Frameshift; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AP005568; BAD33623.1; ALT_INIT; Genomic_DNA.
DR EMBL; AP005886; BAD34098.1; ALT_INIT; Genomic_DNA.
DR EMBL; AP008215; BAF25144.1; ALT_INIT; Genomic_DNA.
DR EMBL; AP014965; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM000146; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_015612682.1; XM_015757196.1.
DR AlphaFoldDB; Q69L19; -.
DR SMR; Q69L19; -.
DR STRING; 4530.OS09T0428000-00; -.
DR CAZy; GT2; Glycosyltransferase Family 2.
DR PaxDb; Q69L19; -.
DR PRIDE; Q69L19; -.
DR GeneID; 4347118; -.
DR KEGG; osa:4347118; -.
DR eggNOG; ENOG502QTBF; Eukaryota.
DR HOGENOM; CLU_012856_1_1_1; -.
DR InParanoid; Q69L19; -.
DR OrthoDB; 312652at2759; -.
DR Proteomes; UP000000763; Chromosome 9.
DR Proteomes; UP000007752; Chromosome 9.
DR Proteomes; UP000059680; Chromosome 9.
DR GO; GO:0005794; C:Golgi apparatus; IBA:GO_Central.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016757; F:glycosyltransferase activity; IBA:GO_Central.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR Gene3D; 3.90.550.10; -; 1.
DR InterPro; IPR001173; Glyco_trans_2-like.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR Pfam; PF13632; Glyco_trans_2_3; 1.
DR SUPFAM; SSF53448; SSF53448; 1.
PE 2: Evidence at transcript level;
KW Cell wall biogenesis/degradation; Glycosyltransferase; Golgi apparatus;
KW Membrane; Reference proteome; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..698
FT /note="Probable xyloglucan glycosyltransferase 2"
FT /id="PRO_0000319384"
FT TRANSMEM 124..144
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 190..210
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 503..523
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 528..548
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 653..668
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 673..693
FT /note="Helical"
FT /evidence="ECO:0000255"
FT ACT_SITE 272
FT /evidence="ECO:0000255"
FT ACT_SITE 425
FT /evidence="ECO:0000255"
FT BINDING 331
FT /ligand="substrate"
FT /evidence="ECO:0000255"
FT BINDING 333
FT /ligand="substrate"
FT /evidence="ECO:0000255"
SQ SEQUENCE 698 AA; 79316 MW; 8A768403B12C95C2 CRC64;
MAPPGVGVGV AYLWGKGRGG RKGTPVVVTM ESPNYSVVEV DGPDAEAELR TAAVAMDKGG
GRGRSRSRTA RQLTWVLLLR ARRAAGRLAS FAAAAARRFR RSPADAADEL GRGRGRLMYG
FIRGFLALSL LALAVELAAY WNGWRLRRPE LHVPEAVEIE GWAHSAYISW MSFRADYIRR
PIEFLSKACI LLFVIQSMDR LVLCLGCFWI KLRKIKPRIE GDPFREGSGY QHPMVLVQIP
MCNEKEVYEQ SISAACQLDW PREKFLIQVL DDSSDESIQL LIKAEVSKWS HQGVNIVYRH
RVLRTGYKAG NLKSAMSCDY VKDYEFVAIF DADFQPTPDF LKKTIPHFEG NPELGLVQAR
WSFVNKDENL LTRLQNINLC FHFEVEQQVN GVFLNFFGFN GTAGVWRIQA LEESGGWLER
TTVEDMDIAV RAHLNGWKFI FLNDVKVLCE LPESYEAYRK QQHRWHSGPM HLFRLCLPDI
LTAKISSWKK ANLILLFFLL RKLILPFYSF TLFCVILPLT MFVPEAELPV WVICYVPVCM
SFLNILPSPR SFPFIVPYLL FENTMSVTKF NAMVSGLFKL GSSYEWIVTK KSGRSSESDL
STAAERDTKD LTLPRLQKQI SESELIELKM QKERQEKAPL GAKKANKVYK KELALSLLLL
TAATRSLLSA QGIHFYFLLF QGVSFLFVGL DLIGEQID
