CSLD3_ORYSJ
ID CSLD3_ORYSJ Reviewed; 1147 AA.
AC Q7EZW6; Q7PC66;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 26-FEB-2008, sequence version 2.
DT 25-MAY-2022, entry version 98.
DE RecName: Full=Cellulose synthase-like protein D3;
DE EC=2.4.1.-;
DE AltName: Full=OsCslD3;
GN Name=CSLD3; OrderedLocusNames=Os08g0345500, LOC_Os08g25710;
GN ORFNames=OsJ_025895, P0410E11.117;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [4]
RP IDENTIFICATION.
RX PubMed=11842136; DOI=10.1104/pp.010875;
RA Hazen S.P., Scott-Craig J.S., Walton J.D.;
RT "Cellulose synthase-like genes of rice.";
RL Plant Physiol. 128:336-340(2002).
RN [5]
RP TISSUE SPECIFICITY.
RX PubMed=17259288; DOI=10.1104/pp.106.091546;
RA Kim C.M., Park S.H., Je B.I., Park S.H., Park S.J., Piao H.L., Eun M.Y.,
RA Dolan L., Han C.-D.;
RT "OsCSLD1, a cellulose synthase-like D1 gene, is required for root hair
RT morphogenesis in rice.";
RL Plant Physiol. 143:1220-1230(2007).
CC -!- FUNCTION: Thought to be a Golgi-localized beta-glycan synthase that
CC polymerize the backbones of noncellulosic polysaccharides
CC (hemicelluloses) of plant cell wall.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305}; Multi-
CC pass membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 2 family. Plant
CC cellulose synthase-like D subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD01697.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=EAZ42412.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP004459; BAD01697.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014964; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM000145; EAZ42412.1; ALT_SEQ; Genomic_DNA.
DR EMBL; BK000093; DAA01756.1; -; Genomic_DNA.
DR RefSeq; XP_015649263.1; XM_015793777.1.
DR AlphaFoldDB; Q7EZW6; -.
DR SMR; Q7EZW6; -.
DR STRING; 4530.OS08T0345500-00; -.
DR PaxDb; Q7EZW6; -.
DR PRIDE; Q7EZW6; -.
DR GeneID; 9271833; -.
DR KEGG; osa:9271833; -.
DR eggNOG; ENOG502QTM8; Eukaryota.
DR HOGENOM; CLU_001418_1_0_1; -.
DR InParanoid; Q7EZW6; -.
DR OrthoDB; 679241at2759; -.
DR PlantReactome; R-OSA-1119314; Cellulose biosynthesis.
DR Proteomes; UP000000763; Chromosome 8.
DR Proteomes; UP000007752; Chromosome 8.
DR Proteomes; UP000059680; Chromosome 8.
DR Genevisible; Q7EZW6; OS.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0016760; F:cellulose synthase (UDP-forming) activity; IEA:InterPro.
DR GO; GO:0051753; F:mannan synthase activity; IBA:GO_Central.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0030244; P:cellulose biosynthetic process; IEA:InterPro.
DR GO; GO:0009833; P:plant-type primary cell wall biogenesis; IBA:GO_Central.
DR Gene3D; 3.30.40.10; -; 1.
DR Gene3D; 3.90.550.10; -; 1.
DR InterPro; IPR005150; Cellulose_synth.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR Pfam; PF03552; Cellulose_synt; 1.
PE 2: Evidence at transcript level;
KW Cell wall biogenesis/degradation; Glycosyltransferase; Golgi apparatus;
KW Membrane; Reference proteome; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..1147
FT /note="Cellulose synthase-like protein D3"
FT /id="PRO_0000319394"
FT TRANSMEM 292..312
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 322..342
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 929..949
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 954..974
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1001..1021
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1045..1065
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1075..1095
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 1108..1128
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..33
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 259..281
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 422
FT /evidence="ECO:0000255"
FT ACT_SITE 847
FT /evidence="ECO:0000255"
SQ SEQUENCE 1147 AA; 127236 MW; BB982AE461B91F01 CRC64;
MSTGPGKKAI RNAGGVGGGA GPSAGGPRGP AGQAVKFARR TSSGRYVSLS REDIDMEGEL
AADYTNYTVQ IPPTPDNQPM LNGAEPASVA MKAEEQYVSN SLFTGGFNSA TRAHLMDKVI
ESSVSHPQMA GAKGSRCAMP ACDGSAMRNE RGEDVDPCEC HFKICRDCYL DAQKDGCICP
GCKEHYKIGE YADDDPHDGK LHLPGPGGGG NKSLLARNQN GEFDHNRWLF ESSGTYGYGN
AFWPKGGMYD DDLDDDVDKL GGDGGGGGGG GPLPEQKPFK PLTRKIPMPT SVISPYRIFI
VIRMFVLLFY LTWRIRNPNM EALWLWGMSI VCELWFAFSW LLDMLPKVNP VNRSTDLAVL
KEKFETPSPS NPHGRSDLPG LDVFVSTADP EKEPVLTTAT TILSILAVDY PVEKLACYVS
DDGGALLTFE AMAEAASFAN VWVPFCKKHD IEPRNPDSYF SVKGDPTKGK RRNDFVKDRR
RVKREFDEFK VRINGLPDSI RRRSDAFNAR EDMKMLKHLR ETGADPSEQP KVKKATWMAD
GSHWPGTWAA SAPDHAKGNH AGILQVMLKP PSPDPLYGMH DDDQMIDFSD VDIRLPMLVY
MSREKRPGYD HNKKAGAMNA LVRCSAVMSN GPFMLNFDCD HYINNAQAVR EAMCFFMDRG
GERIAYIQFP QRFEGIDPSD RYANNNTVFF DGNMRALDGL QGPMYVGTGC MFRRFAVYGF
DPPRTAEYTG WLFTKKKVTT FKDPESDTQT LKAEDFDAEL TSHLVPRRFG NSSPFMASIP
VAEFQARPLA DHPAVLHGRP SGALTVPRPP LDPPTVAEAV SVISCWYEDK TEWGDRVGWI
YGSVTEDVVT GYRMHNRGWR SVYCITKRDA FLGTAPINLT DRLHQVLRWA TGSVEIFFSR
NNAFLASRKL MLLQRISYLN VGIYPFTSIF LLVYCFIPAL SLFSGFFIVQ KLDIAFLCYL
LTMTITLVAL GILEVKWSGI ELEDWWRNEQ FWLISGTSAH LYAVVQGLLK VMAGIEISFT
LTAKAAADDN EDIYADLYIV KWSSLLIPPI TIGMVNIIAI AFAFARTIYS DNPRWGKFIG
GGFFSFWVLA HLNPFAKGLM GRRGKTPTIV FVWSGLLSIT VSLLWVAISP PEANSNGGAR
GGGFQFP
