CSLE1_ORYSJ
ID CSLE1_ORYSJ Reviewed; 737 AA.
AC Q651X7; A0A0P0XNI3; Q651X8; Q8W1N2; Q944E4;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 26-FEB-2008, sequence version 2.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Cellulose synthase-like protein E1;
DE EC=2.4.1.-;
DE AltName: Full=OsCslE1;
GN Name=CSLE1; OrderedLocusNames=Os09g0478100, LOC_Os09g30120;
GN ORFNames=OsJ_028602, P0556A05.31-1, P0556A05.31-2;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND NUCLEOTIDE SEQUENCE [MRNA] OF
RP 419-737.
RX PubMed=11842136; DOI=10.1104/pp.010875;
RA Hazen S.P., Scott-Craig J.S., Walton J.D.;
RT "Cellulose synthase-like genes of rice.";
RL Plant Physiol. 128:336-340(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Thought to be a Golgi-localized beta-glycan synthase that
CC polymerize the backbones of noncellulosic polysaccharides
CC (hemicelluloses) of plant cell wall.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305}; Multi-
CC pass membrane protein {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q651X7-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q651X7-2; Sequence=VSP_031474;
CC -!- SIMILARITY: Belongs to the glycosyltransferase 2 family. Plant
CC cellulose synthase-like E subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAL25129.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF432500; AAL25129.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AF435647; AAL38532.1; -; mRNA.
DR EMBL; AP005759; BAD46389.1; -; Genomic_DNA.
DR EMBL; AP005759; BAD46390.1; -; Genomic_DNA.
DR EMBL; AP008215; BAF25383.1; -; Genomic_DNA.
DR EMBL; AP014965; BAT08614.1; -; Genomic_DNA.
DR EMBL; CM000146; EAZ45119.1; -; Genomic_DNA.
DR EMBL; AK102766; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; AK103810; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015611685.1; XM_015756199.1. [Q651X7-1]
DR RefSeq; XP_015611687.1; XM_015756201.1. [Q651X7-2]
DR AlphaFoldDB; Q651X7; -.
DR SMR; Q651X7; -.
DR STRING; 4530.OS09T0478100-01; -.
DR CAZy; GT2; Glycosyltransferase Family 2.
DR PaxDb; Q651X7; -.
DR PRIDE; Q651X7; -.
DR EnsemblPlants; Os09t0478100-01; Os09t0478100-01; Os09g0478100. [Q651X7-1]
DR GeneID; 4347370; -.
DR Gramene; Os09t0478100-01; Os09t0478100-01; Os09g0478100. [Q651X7-1]
DR KEGG; osa:4347370; -.
DR eggNOG; ENOG502QS7H; Eukaryota.
DR InParanoid; Q651X7; -.
DR OMA; LLEFFFC; -.
DR OrthoDB; 679241at2759; -.
DR Proteomes; UP000000763; Chromosome 9.
DR Proteomes; UP000007752; Chromosome 9.
DR Proteomes; UP000059680; Chromosome 9.
DR ExpressionAtlas; Q651X7; baseline and differential.
DR Genevisible; Q651X7; OS.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0016760; F:cellulose synthase (UDP-forming) activity; IEA:InterPro.
DR GO; GO:0051753; F:mannan synthase activity; IBA:GO_Central.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0030244; P:cellulose biosynthetic process; IEA:InterPro.
DR GO; GO:0009833; P:plant-type primary cell wall biogenesis; IBA:GO_Central.
DR Gene3D; 3.90.550.10; -; 1.
DR InterPro; IPR005150; Cellulose_synth.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR Pfam; PF03552; Cellulose_synt; 2.
PE 2: Evidence at transcript level;
KW Alternative splicing; Cell wall biogenesis/degradation;
KW Glycosyltransferase; Golgi apparatus; Membrane; Reference proteome;
KW Transferase; Transmembrane; Transmembrane helix.
FT CHAIN 1..737
FT /note="Cellulose synthase-like protein E1"
FT /id="PRO_0000319398"
FT TRANSMEM 26..45
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 58..78
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 528..548
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 551..571
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 654..674
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 683..703
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 716..736
FT /note="Helical"
FT /evidence="ECO:0000255"
FT ACT_SITE 146
FT /evidence="ECO:0000255"
FT ACT_SITE 451
FT /evidence="ECO:0000255"
FT VAR_SEQ 1..129
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:12869764"
FT /id="VSP_031474"
FT CONFLICT 204
FT /note="N -> D (in Ref. 6; AK102766)"
FT /evidence="ECO:0000305"
FT CONFLICT 295
FT /note="I -> M (in Ref. 6; AK102766)"
FT /evidence="ECO:0000305"
FT CONFLICT 530
FT /note="A -> V (in Ref. 6; AK102766)"
FT /evidence="ECO:0000305"
FT CONFLICT 635
FT /note="E -> Q (in Ref. 1; AAL38532)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 737 AA; 83497 MW; 85AC9E6FA26E7CFC CRC64;
METTAAATAA ERRRPLFTTE ELGGRAVYRV QAATVAAGIL LVLYYRATRV PAAGEGRAAW
LGMAAAELWF AVYWVIAQSV RWRPFRRRTF RDRLAERYEQ NLPGVDIFVC TADPQSEPPS
LVISTILSVM AYNYPSEKIS VYLSDDGGSI LTFYALWEAS IFAKKWLPFC KRYNIEPRSP
AAYFSESKVH HNLCIPKEWA LIKNLYEEMR ERIDTATMSG KIPEEMKLKH KGFDEWNSDF
TLKNHQPIVQ ILIDGKNRNA IDDDRNVLPT MVYVAREKRP QYHHNFKAGA LNALIRVSSV
ISDSPVILNV DCDMYSNNSD SIRDALCFFL DEEMGQKIGF VQYPQIFNNM TQNDIYGNSF
NVSYHVEMCG LDSVGGCLYI GTGCFHRREI LCGRIFSKDY KENWNRGIKE RGKENINEIE
EKATSLVTCT YEHRTQWGND IGVKYGFPAE DIITGLAIHC RGWESAFINP KRAAFLGLAP
STLAQNILQH KRWSEGNLTI FLSKYCSFLF GHGKIKLQLQ MGYCICGLWA ANSLPTLYYV
VIPSLGLVKG TPLFPQIMSP WATPFIYVFC VKTLYGLYEA LLSGDTLKGW WNGQRMWMVK
SITSYLYGFI DTIRKCVGMS KMSFEVTAKV SGHDEAKRYE QEILEFGSSS PEYVIIATVA
LLNFVCLVGG LSQIMAGVWN MPWNVFLPQA ILCGMIVIIN MPIYEAMFLR KDNGRIPTAV
TLASIGFVML AFLVPIV
