CSLF3_ORYSJ
ID CSLF3_ORYSJ Reviewed; 868 AA.
AC Q6ZF85; Q0D5L1; Q944E0;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=Probable mixed-linked glucan synthase 3;
DE EC=2.4.1.-;
DE AltName: Full=1,3;1,4-beta-D-glucan synthase 3;
DE AltName: Full=Cellulose synthase-like protein F3;
DE AltName: Full=OsCslF3;
GN Name=CSLF3; OrderedLocusNames=Os07g0553400, LOC_Os07g36750;
GN ORFNames=OsJ_023724, P0013G11.12;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=11842136; DOI=10.1104/pp.010875;
RA Hazen S.P., Scott-Craig J.S., Walton J.D.;
RT "Cellulose synthase-like genes of rice.";
RL Plant Physiol. 128:336-340(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: May catalyze both beta-1,3 and beta-1,4 glycosidic linkage on
CC beta-D-glucan. Essential for (1,3;1,4)-beta-D-glucans synthesis in
CC grasses and cereals (Poaceae). The mixed-linked glucans (which are not
CC present in walls of dicotyledons or most other monocotyledonous plants)
CC are particularly important constituents of the walls of the starchy
CC endosperm and aleurone cells of cereal grains such as oats, wheat, rice
CC and barley. They can account for up to 70% by weight of the wall (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305}; Multi-
CC pass membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 2 family. Plant
CC cellulose synthase-like F subfamily. {ECO:0000305}.
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DR EMBL; AF432504; AAL25133.1; -; Genomic_DNA.
DR EMBL; AP004261; BAC83322.1; -; Genomic_DNA.
DR EMBL; AP008213; BAF21862.2; -; Genomic_DNA.
DR EMBL; AP014963; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM000144; EAZ40241.1; -; Genomic_DNA.
DR RefSeq; XP_015645457.1; XM_015789971.1.
DR AlphaFoldDB; Q6ZF85; -.
DR SMR; Q6ZF85; -.
DR STRING; 39947.Q6ZF85; -.
DR CAZy; GT2; Glycosyltransferase Family 2.
DR PaxDb; Q6ZF85; -.
DR PRIDE; Q6ZF85; -.
DR EnsemblPlants; Os07t0553400-01; Os07t0553400-01; Os07g0553400.
DR GeneID; 4343555; -.
DR Gramene; Os07t0553400-01; Os07t0553400-01; Os07g0553400.
DR KEGG; osa:4343555; -.
DR InParanoid; Q6ZF85; -.
DR OrthoDB; 679241at2759; -.
DR Proteomes; UP000000763; Chromosome 7.
DR Proteomes; UP000007752; Chromosome 7.
DR Proteomes; UP000059680; Chromosome 7.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0016760; F:cellulose synthase (UDP-forming) activity; IEA:InterPro.
DR GO; GO:0051753; F:mannan synthase activity; IBA:GO_Central.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0030244; P:cellulose biosynthetic process; IEA:InterPro.
DR GO; GO:0009833; P:plant-type primary cell wall biogenesis; IBA:GO_Central.
DR Gene3D; 3.90.550.10; -; 1.
DR InterPro; IPR005150; Cellulose_synth.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR Pfam; PF03552; Cellulose_synt; 2.
DR SUPFAM; SSF53448; SSF53448; 1.
PE 3: Inferred from homology;
KW Cell wall biogenesis/degradation; Glycosyltransferase; Golgi apparatus;
KW Membrane; Reference proteome; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..868
FT /note="Probable mixed-linked glucan synthase 3"
FT /id="PRO_0000319404"
FT TRANSMEM 86..106
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 116..136
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 649..669
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 686..706
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 717..737
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 771..791
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 810..830
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 838..858
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 36..68
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 52..68
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 211
FT /evidence="ECO:0000255"
FT ACT_SITE 573
FT /evidence="ECO:0000255"
FT BINDING 412
FT /ligand="substrate"
FT /evidence="ECO:0000255"
FT BINDING 414
FT /ligand="substrate"
FT /evidence="ECO:0000255"
SQ SEQUENCE 868 AA; 97689 MW; B9B99E04384E74D3 CRC64;
MASPASVAGG GEDSNGCSSL IDPLLVSRTS SIGGAERKAA GGGGGGAKGK HWAAADKGER
RAAKECGGED GRRPLLFRSY RVKGSLLHPY RALIFARLIA VLLFFGWRIR HNNSDIMWFW
TMSVAGDVWF GFSWLLNQLP KFNPVKTIPD LTALRQYCDL ADGSYRLPGI DVFVTTADPI
DEPVLYTMNC VLSILAADYP VDRSACYLSD DSGALILYEA LVETAKFATL WVPFCRKHCI
EPRSPESYFE LEAPSYTGSA PEEFKNDSRI VHLEYDEFKV RLEALPETIR KRSDVYNSMK
TDQGAPNATW MANGTQWPGT WIEPIENHRK GHHAGIVKVV LDHPIRGHNL SLKDSTGNNL
NFNATDVRIP MLVYVSRGKN PNYDHNKKAG ALNAQLRASA LLSNAQFIIN FDCDHYINNS
QAFRAAICFM LDQREGDNTA FVQFPQRFDN VDPKDRYGNH NRVFFDGTML ALNGLQGPSY
LGTGCMFRRL ALYGIDPPHW RQDNITPEAS KFGNSILLLE SVLEALNQDR FATPSPVNDI
FVNELEMVVS ASFDKETDWG KGVGYIYDIA TEDIVTGFRI HGQGWRSMYC TMEHDAFCGT
APINLTERLH QIVRWSGGSL EMFFSHNNPL IGGRRLQPLQ RVSYLNMTIY PVTSLFILLY
AISPVMWLIP DEVYIQRPFT RYVVYLLVII LMIHMIGWLE IKWAGITWLD YWRNEQFFMI
GSTSAYPTAV LHMVVNLLTK KGIHFRVTSK QTTADTNDKF ADLYEMRWVP MLIPTMVVLV
ANIGAIGVAI GKTAVYMGVW TIAQKRHAAM GLLFNMWVMF LLYPFALAIM GRWAKRSIIL
VVLLPIIFVI VALVYVATHI LLANIIPF
