CSLH1_ORYSJ
ID CSLH1_ORYSJ Reviewed; 750 AA.
AC Q339N5; B7EFU3; Q7PC72; Q8LMB4; Q8W1N3;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 2.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=Cellulose synthase-like protein H1;
DE EC=2.4.1.-;
DE AltName: Full=OsCslH1;
GN Name=CSLH1; OrderedLocusNames=Os10g0341700, LOC_Os10g20090;
GN ORFNames=OSJNBa0035F15.9;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12791992; DOI=10.1126/science.1083523;
RA Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K., Thompson S.,
RA Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S., Henry D.,
RA Oates R., Palmer M., Pries G., Gibson J., Anderson H., Paradkar M.,
RA Crane L., Dale J., Carver M.B., Wood T., Frisch D., Engler F.,
RA Soderlund C., Palmer L.E., Teytelman L., Nascimento L., De la Bastide M.,
RA Spiegel L., Ware D., O'Shaughnessy A., Dike S., Dedhia N., Preston R.,
RA Huang E., Ferraro K., Kuit K., Miller B., Zutavern T., Katzenberger F.,
RA Muller S., Balija V., Martienssen R.A., Stein L., Minx P., Johnson D.,
RA Cordum H., Mardis E., Cheng Z., Jiang J., Wilson R., McCombie W.R.,
RA Wing R.A., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Tsitrin T., Overton L., Bera J., Kim M., Jin S.,
RA Tallon L., Ciecko A., Pai G., Van Aken S., Utterback T., Reidmuller S.,
RA Bormann J., Feldblyum T., Hsiao J., Zismann V., Blunt S., de Vazeille A.R.,
RA Shaffer T., Koo H., Suh B., Yang Q., Haas B., Peterson J., Pertea M.,
RA Volfovsky N., Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R.,
RA Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S., Bowers J.E.,
RA Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.;
RT "In-depth view of structure, activity, and evolution of rice chromosome
RT 10.";
RL Science 300:1566-1569(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 8-750, AND IDENTIFICATION.
RX PubMed=11842136; DOI=10.1104/pp.010875;
RA Hazen S.P., Scott-Craig J.S., Walton J.D.;
RT "Cellulose synthase-like genes of rice.";
RL Plant Physiol. 128:336-340(2002).
CC -!- FUNCTION: Thought to be a Golgi-localized beta-glycan synthase that
CC polymerize the backbones of noncellulosic polysaccharides
CC (hemicelluloses) of plant cell wall.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305}; Multi-
CC pass membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 2 family. Plant
CC cellulose synthase-like H subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAN01252.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC119148; AAN01252.1; ALT_SEQ; Genomic_DNA.
DR EMBL; DP000086; ABB47242.2; -; Genomic_DNA.
DR EMBL; AP008216; BAF26298.1; -; Genomic_DNA.
DR EMBL; AP014966; BAT10412.1; -; Genomic_DNA.
DR EMBL; AK069071; BAG91240.1; -; mRNA.
DR EMBL; AF435646; AAL38531.1; -; mRNA.
DR EMBL; BK000084; DAA01747.1; -; Genomic_DNA.
DR RefSeq; XP_015614519.1; XM_015759033.1.
DR AlphaFoldDB; Q339N5; -.
DR SMR; Q339N5; -.
DR STRING; 4530.OS10T0341700-01; -.
DR CAZy; GT2; Glycosyltransferase Family 2.
DR PaxDb; Q339N5; -.
DR PRIDE; Q339N5; -.
DR EnsemblPlants; Os10t0341700-01; Os10t0341700-01; Os10g0341700.
DR EnsemblPlants; Os10t0341700-02; Os10t0341700-02; Os10g0341700.
DR GeneID; 4348359; -.
DR Gramene; Os10t0341700-01; Os10t0341700-01; Os10g0341700.
DR Gramene; Os10t0341700-02; Os10t0341700-02; Os10g0341700.
DR KEGG; osa:4348359; -.
DR eggNOG; ENOG502QTT0; Eukaryota.
DR HOGENOM; CLU_001418_3_3_1; -.
DR InParanoid; Q339N5; -.
DR OMA; RGWKSII; -.
DR OrthoDB; 267925at2759; -.
DR Proteomes; UP000000763; Chromosome 10.
DR Proteomes; UP000059680; Chromosome 10.
DR ExpressionAtlas; Q339N5; baseline and differential.
DR Genevisible; Q339N5; OS.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0016760; F:cellulose synthase (UDP-forming) activity; IEA:InterPro.
DR GO; GO:0051753; F:mannan synthase activity; IBA:GO_Central.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR GO; GO:0030244; P:cellulose biosynthetic process; IEA:InterPro.
DR GO; GO:0009833; P:plant-type primary cell wall biogenesis; IBA:GO_Central.
DR Gene3D; 3.90.550.10; -; 1.
DR InterPro; IPR005150; Cellulose_synth.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR Pfam; PF03552; Cellulose_synt; 2.
DR SUPFAM; SSF53448; SSF53448; 1.
PE 2: Evidence at transcript level;
KW Cell wall biogenesis/degradation; Glycosyltransferase; Golgi apparatus;
KW Membrane; Reference proteome; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..750
FT /note="Cellulose synthase-like protein H1"
FT /id="PRO_0000319410"
FT TRANSMEM 27..47
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 52..72
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 537..557
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 570..590
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 608..628
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 664..684
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 697..717
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 727..747
FT /note="Helical"
FT /evidence="ECO:0000255"
FT ACT_SITE 137
FT /evidence="ECO:0000255"
FT ACT_SITE 459
FT /evidence="ECO:0000255"
FT CONFLICT 8..11
FT /note="NKKL -> PRVR (in Ref. 6; AAL38531)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 750 AA; 83833 MW; EAD6ACADF98E2E52 CRC64;
MEAAARGNKK LQERVPIRRT AWRLADLAIL FLLLALLLHR VLHDSGAPWR RAALACEAWF
TFMWLLNVNA KWSPVRFDTF PENLAERIDE LPAVDMFVTT ADPVLEPPLV TVNTVLSLLA
LDYPAAGEKL ACYVSDDGCS PLTCYALREA ARFARTWVPF CRRHGVAVRA PFRYFSSTPE
FGPADGKFLE DWTFMKSEYE KLVHRIEDAD EPSLLRHGGG EFAEFLDVER GNHPTIIKVL
WDNNRSRTGD GFPRLIYVSR EKSPNLHHHY KAGAMNALTR VSALMTNAPF MLNLDCDMFV
NNPRVVLHAM CLLLGFDDEI SCAFVQTPQK FYGALKDDPF GNQLEVSLMK VGRGIAGLQG
IFYCGTGCFH RRKVIYGMRT GREGTTGYSS NKELHSKFGS SNNFKESARD VIYGNLSTEP
IVDISSCVDV AKEVAACNYE IGTCWGQEVG WVYGSLTEDV LTGQRIHAAG WRSTLMEIEP
PAFMGCAPNG GPACLTQLKR WASGFLEILI SRNNPILTTT FKSLQFRQCL AYLHSYVWPV
RAPFELCYAL LGPYCLLSNQ SFLPKTSEDG FYIALALFIA YNTYMFMEFI ECGQSARACW
NNHRMQRITS ASAWLLAFLT VILKTLGFSE TVFEVTRKDK STSDGDSNTD EPEPGRFTFD
ESTVFIPVTA LAMLSVIAIA VGAWRVVLVT TEGLPGGPGI SEFISCGWLV LCFMPLLRGL
VGSGRYGIPW SIKMKACLLV AIFLLFCKRN
