CSN12_USTMA
ID CSN12_USTMA Reviewed; 454 AA.
AC Q4P8T5; A0A0D1DVR8;
DT 06-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2005, sequence version 1.
DT 03-AUG-2022, entry version 73.
DE RecName: Full=Protein CSN12 homolog;
GN Name=CSN12; ORFNames=UMAG_03478;
OS Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina;
OC Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago.
OX NCBI_TaxID=237631;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=521 / FGSC 9021;
RX PubMed=17080091; DOI=10.1038/nature05248;
RA Kaemper J., Kahmann R., Boelker M., Ma L.-J., Brefort T., Saville B.J.,
RA Banuett F., Kronstad J.W., Gold S.E., Mueller O., Perlin M.H.,
RA Woesten H.A.B., de Vries R., Ruiz-Herrera J., Reynaga-Pena C.G.,
RA Snetselaar K., McCann M., Perez-Martin J., Feldbruegge M., Basse C.W.,
RA Steinberg G., Ibeas J.I., Holloman W., Guzman P., Farman M.L.,
RA Stajich J.E., Sentandreu R., Gonzalez-Prieto J.M., Kennell J.C., Molina L.,
RA Schirawski J., Mendoza-Mendoza A., Greilinger D., Muench K., Roessel N.,
RA Scherer M., Vranes M., Ladendorf O., Vincon V., Fuchs U., Sandrock B.,
RA Meng S., Ho E.C.H., Cahill M.J., Boyce K.J., Klose J., Klosterman S.J.,
RA Deelstra H.J., Ortiz-Castellanos L., Li W., Sanchez-Alonso P.,
RA Schreier P.H., Haeuser-Hahn I., Vaupel M., Koopmann E., Friedrich G.,
RA Voss H., Schlueter T., Margolis J., Platt D., Swimmer C., Gnirke A.,
RA Chen F., Vysotskaia V., Mannhaupt G., Gueldener U., Muensterkoetter M.,
RA Haase D., Oesterheld M., Mewes H.-W., Mauceli E.W., DeCaprio D., Wade C.M.,
RA Butler J., Young S.K., Jaffe D.B., Calvo S.E., Nusbaum C., Galagan J.E.,
RA Birren B.W.;
RT "Insights from the genome of the biotrophic fungal plant pathogen Ustilago
RT maydis.";
RL Nature 444:97-101(2006).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=521 / FGSC 9021;
RA Gueldener U., Muensterkoetter M., Walter M.C., Mannhaupt G., Kahmann R.;
RL Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the CSN12 family. {ECO:0000305}.
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DR EMBL; CM003148; KIS68384.1; -; Genomic_DNA.
DR RefSeq; XP_011389934.1; XM_011391632.1.
DR AlphaFoldDB; Q4P8T5; -.
DR SMR; Q4P8T5; -.
DR STRING; 5270.UM03478P0; -.
DR EnsemblFungi; KIS68384; KIS68384; UMAG_03478.
DR GeneID; 23563921; -.
DR KEGG; uma:UMAG_03478; -.
DR VEuPathDB; FungiDB:UMAG_03478; -.
DR eggNOG; KOG2688; Eukaryota.
DR HOGENOM; CLU_031567_2_1_1; -.
DR InParanoid; Q4P8T5; -.
DR OMA; TILCVER; -.
DR OrthoDB; 706700at2759; -.
DR Proteomes; UP000000561; Chromosome 9.
DR GO; GO:0070390; C:transcription export complex 2; IBA:GO_Central.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0016973; P:poly(A)+ mRNA export from nucleus; IBA:GO_Central.
DR GO; GO:0000973; P:post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IBA:GO_Central.
DR GO; GO:0006368; P:transcription elongation from RNA polymerase II promoter; IBA:GO_Central.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR045114; Csn12-like.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR12732; PTHR12732; 1.
DR Pfam; PF01399; PCI; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..454
FT /note="Protein CSN12 homolog"
FT /id="PRO_0000121045"
FT DOMAIN 246..442
FT /note="PCI"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01185"
SQ SEQUENCE 454 AA; 50083 MW; FBA76950BB65F46D CRC64;
MKPSIFADAV ITACQACDGH ALAELFAIGG GVAASALLEL GDVRPGGMIC SLRKCSGYLG
SPWEDMCVNH LRSLYSFSLA SSLPASASDA VDGEGKTRSE RLGEAFDAYN SVVSAFVRYF
STLTPGRWAL PLLRILCLNL RWLAVQADSA AHIASVSNTW APTRSTQPNK RLEECARQLN
KAFSACIADR NADMHESRKW GTYEVVGMVF KTYFRLKSVG LCRNILRAIN AADLPDLCAY
PRSQQVTFRY YVGVLAFLNE EYDHAELELQ ASLQMCHRCA LINQGLILTY LIPVKLLKGS
LPHPSLLDPT TPIGRKLAVY QPFTRALRTG DVKAFDQALA NPTIESSLVK RGTYIAIERA
RDATLRTLLK TIWLSLPLNP TNTRPTRLTL TLLHHATSTD LIRLKYSIKE LEWILATLIY
KGYVKGYIAH ERGVLVLSAK DAFPALRTVA IATT