CSPA_SHEVD
ID CSPA_SHEVD Reviewed; 70 AA.
AC Q9S1B7; D4ZL74;
DT 13-AUG-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Cold shock-like protein CspA;
GN Name=cspA; OrderedLocusNames=SVI_2452;
OS Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=637905;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=10483731; DOI=10.1111/j.1574-6968.1999.tb13767.x;
RA Fujii S., Nakasone K., Horikoshi K.;
RT "Cloning of two cold shock genes, cspA and cspG, from the deep-sea
RT psychrophilic bacterium Shewanella violacea strain DSS12.";
RL FEMS Microbiol. Lett. 178:123-128(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 10179 / CIP 106290 / LMG 19151 / DSS12;
RX PubMed=20458400; DOI=10.1039/c000396d;
RA Aono E., Baba T., Ara T., Nishi T., Nakamichi T., Inamoto E., Toyonaga H.,
RA Hasegawa M., Takai Y., Okumura Y., Baba M., Tomita M., Kato C., Oshima T.,
RA Nakasone K., Mori H.;
RT "Complete genome sequence and comparative analysis of Shewanella violacea,
RT a psychrophilic and piezophilic bacterium from deep sea floor sediments.";
RL Mol. Biosyst. 6:1216-1226(2010).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- INDUCTION: By cold shock.
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DR EMBL; AB015429; BAA84217.1; -; Genomic_DNA.
DR EMBL; AP011177; BAJ02423.1; -; Genomic_DNA.
DR RefSeq; WP_013051727.1; NC_014012.1.
DR AlphaFoldDB; Q9S1B7; -.
DR SMR; Q9S1B7; -.
DR STRING; 637905.SVI_2452; -.
DR PRIDE; Q9S1B7; -.
DR EnsemblBacteria; BAJ02423; BAJ02423; SVI_2452.
DR KEGG; svo:SVI_2452; -.
DR eggNOG; COG1278; Bacteria.
DR HOGENOM; CLU_117621_0_3_6; -.
DR OMA; AHFRQIQ; -.
DR OrthoDB; 2034748at2; -.
DR Proteomes; UP000002350; Chromosome.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR012156; Cold_shock_CspA.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR Pfam; PF00313; CSD; 1.
DR PIRSF; PIRSF002599; Cold_shock_A; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 2: Evidence at transcript level;
KW Activator; Cytoplasm; DNA-binding; Reference proteome; Stress response;
KW Transcription; Transcription regulation.
FT CHAIN 1..70
FT /note="Cold shock-like protein CspA"
FT /id="PRO_0000100326"
FT DOMAIN 7..67
FT /note="CSD"
SQ SEQUENCE 70 AA; 7583 MW; 8DB9BBDA4287C578 CRC64;
MSDSNTGTVK WFNEDKGFGF LTQDNGGADV FVHFRAIASE GFKTLDEGQK VTFEVEQGPK
GLQASNVIAL