CSPB_ECOLI
ID CSPB_ECOLI Reviewed; 71 AA.
AC P36995;
DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1994, sequence version 1.
DT 03-AUG-2022, entry version 145.
DE RecName: Full=Cold shock-like protein CspB;
DE Short=CSP-B;
GN Name=cspB; OrderedLocusNames=b1557, JW1549;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=TAP90 / ATCC 47037;
RX PubMed=8022261; DOI=10.1111/j.1365-2958.1994.tb00361.x;
RA Lee S.J., Xie A., Jiang W., Etchegaray J.-P., Jones P.G., Inouye M.;
RT "Family of the major cold-shock protein, CspA (CS7.4), of Escherichia coli,
RT whose members show a high sequence similarity with the eukaryotic Y-box
RT binding proteins.";
RL Mol. Microbiol. 11:833-839(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9439003; DOI=10.1038/sj.jim.2900463;
RA Francis K.P., Stewart G.S.A.B.;
RT "Detection and speciation of bacteria through PCR using universal major
RT cold-shock protein primer oligomers.";
RL J. Ind. Microbiol. Biotechnol. 19:286-293(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097039; DOI=10.1093/dnares/3.6.363;
RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K.,
RA Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S.,
RA Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G.,
RA Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y.,
RA Wada C., Yamamoto Y., Horiuchi T.;
RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 28.0-40.1 min region on the linkage map.";
RL DNA Res. 3:363-377(1996).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [6]
RP INDUCTION BY COLD-SHOCK.
RC STRAIN=CSH142;
RX PubMed=8898389; DOI=10.1111/j.1365-2958.1996.tb02582.x;
RA Jones P.G., Inouye M.;
RT "RbfA, a 30S ribosomal binding factor, is a cold-shock protein whose
RT absence triggers the cold-shock response.";
RL Mol. Microbiol. 21:1207-1218(1996).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- INDUCTION: In response to low temperature (at protein level).
CC {ECO:0000269|PubMed:8898389}.
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DR EMBL; L28429; AAA23618.1; -; Genomic_DNA.
DR EMBL; AF003590; AAB61739.1; -; Genomic_DNA.
DR EMBL; U00096; AAC74630.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA15256.1; -; Genomic_DNA.
DR PIR; S43617; S43617.
DR RefSeq; NP_416075.1; NC_000913.3.
DR RefSeq; WP_000066484.1; NZ_SSUV01000001.1.
DR AlphaFoldDB; P36995; -.
DR SMR; P36995; -.
DR BioGRID; 4259129; 6.
DR DIP; DIP-9334N; -.
DR IntAct; P36995; 33.
DR STRING; 511145.b1557; -.
DR PaxDb; P36995; -.
DR PRIDE; P36995; -.
DR EnsemblBacteria; AAC74630; AAC74630; b1557.
DR EnsemblBacteria; BAA15256; BAA15256; BAA15256.
DR GeneID; 67415737; -.
DR GeneID; 946091; -.
DR KEGG; ecj:JW1549; -.
DR KEGG; eco:b1557; -.
DR PATRIC; fig|1411691.4.peg.706; -.
DR EchoBASE; EB2119; -.
DR eggNOG; COG1278; Bacteria.
DR HOGENOM; CLU_117621_2_1_6; -.
DR InParanoid; P36995; -.
DR OMA; APVREND; -.
DR PhylomeDB; P36995; -.
DR BioCyc; EcoCyc:EG12203-MON; -.
DR PRO; PR:P36995; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005829; C:cytosol; IDA:EcoCyc.
DR GO; GO:0003676; F:nucleic acid binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IDA:EcoCyc.
DR GO; GO:0098847; F:sequence-specific single stranded DNA binding; IDA:EcoCyc.
DR GO; GO:0003697; F:single-stranded DNA binding; IDA:EcoliWiki.
DR GO; GO:0001072; F:transcription antitermination factor activity, RNA binding; IBA:GO_Central.
DR GO; GO:0060567; P:negative regulation of DNA-templated transcription, termination; IBA:GO_Central.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR GO; GO:0009409; P:response to cold; IDA:EcoliWiki.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR012156; Cold_shock_CspA.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR Pfam; PF00313; CSD; 1.
DR PIRSF; PIRSF002599; Cold_shock_A; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 1: Evidence at protein level;
KW Activator; Cytoplasm; DNA-binding; Reference proteome; Stress response;
KW Transcription; Transcription regulation.
FT CHAIN 1..71
FT /note="Cold shock-like protein CspB"
FT /id="PRO_0000100240"
FT DOMAIN 7..67
FT /note="CSD"
SQ SEQUENCE 71 AA; 7717 MW; B8672969E165AD8A CRC64;
MSNKMTGLVK WFNADKGFGF ISPVDGSKDV FVHFSAIQND NYRTLFEGQK VTFSIESGAK
GPAAANVIIT D
