CSPC_ECOLW
ID CSPC_ECOLW Reviewed; 69 AA.
AC E0J500; H9Y2G5;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 02-NOV-2010, sequence version 1.
DT 03-AUG-2022, entry version 51.
DE RecName: Full=Cold shock-like protein CspC;
DE Short=CSP-C;
GN Name=cspC; OrderedLocusNames=ECW_m1994, WFL_09790;
GN ORFNames=EschWDRAFT_3657;
OS Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / LMG 11080 / NBRC
OS 13500 / NCIMB 8666 / NRRL B-766 / W).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=566546;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 9637 / CCM 2024 / DSM 1116 / LMG 11080 / NBRC 13500 / NCIMB
RC 8666 / NRRL B-766 / W;
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L.,
RA Pitluck S., Land M.L., Hauser L., Chang Y.-J., Jeffries C., Tremaine M.,
RA Landick R., Keating D., Woyke T.J.;
RT "The draft genome of Escherichia coli W.";
RL Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 9637 / CCM 2024 / DSM 1116 / LMG 11080 / NBRC 13500 / NCIMB
RC 8666 / NRRL B-766 / W;
RX PubMed=21208457; DOI=10.1186/1471-2164-12-9;
RA Archer C.T., Kim J.F., Jeong H., Park J.H., Vickers C.E., Lee S.Y.,
RA Nielsen L.K.;
RT "The genome sequence of E. coli W (ATCC 9637): comparative genome analysis
RT and an improved genome-scale reconstruction of E. coli.";
RL BMC Genomics 12:9-9(2011).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 9637 / CCM 2024 / DSM 1116 / LMG 11080 / NBRC 13500 / NCIMB
RC 8666 / NRRL B-766 / W;
RX PubMed=22075923; DOI=10.1007/s10295-011-1052-2;
RA Turner P.C., Yomano L.P., Jarboe L.R., York S.W., Baggett C.L.,
RA Moritz B.E., Zentz E.B., Shanmugam K.T., Ingram L.O.;
RT "Optical mapping and sequencing of the Escherichia coli KO11 genome reveal
RT extensive chromosomal rearrangements, and multiple tandem copies of the
RT Zymomonas mobilis pdc and adhB genes.";
RL J. Ind. Microbiol. Biotechnol. 39:629-639(2012).
RN [4]
RP MASS SPECTROMETRY.
RC STRAIN=ATCC 9637 / CCM 2024 / DSM 1116 / LMG 11080 / NBRC 13500 / NCIMB
RC 8666 / NRRL B-766 / W;
RX PubMed=9921691;
RX DOI=10.1002/(sici)1097-0231(19990115)13:1<73::aid-rcm454>3.0.co;2-n;
RA Dai Y., Li L., Roser D.C., Long S.R.;
RT "Detection and identification of low-mass peptides and proteins from
RT solvent suspensions of Escherichia coli by high performance liquid
RT chromatography fractionation and matrix-assisted laser
RT desorption/ionization mass spectrometry.";
RL Rapid Commun. Mass Spectrom. 13:73-78(1999).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- MASS SPECTROMETRY: Mass=7279.9; Method=MALDI;
CC Evidence={ECO:0000269|PubMed:9921691};
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DR EMBL; AEDF01000024; EFN36753.1; -; Genomic_DNA.
DR EMBL; CP002185; ADT75453.1; -; Genomic_DNA.
DR EMBL; CP002967; AFH11617.1; -; Genomic_DNA.
DR RefSeq; WP_001062678.1; NZ_WBMH01000044.1.
DR AlphaFoldDB; E0J500; -.
DR SMR; E0J500; -.
DR EnsemblBacteria; ADT75453; ADT75453; ECW_m1994.
DR GeneID; 8911702; -.
DR KEGG; ell:WFL_09790; -.
DR KEGG; elw:ECW_m1994; -.
DR PATRIC; fig|566546.30.peg.2037; -.
DR HOGENOM; CLU_117621_2_1_6; -.
DR OMA; FEIQDGH; -.
DR Proteomes; UP000008525; Chromosome.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR012156; Cold_shock_CspA.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR Pfam; PF00313; CSD; 1.
DR PIRSF; PIRSF002599; Cold_shock_A; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 1: Evidence at protein level;
KW Activator; Cytoplasm; DNA-binding; Transcription; Transcription regulation.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000305"
FT CHAIN 2..69
FT /note="Cold shock-like protein CspC"
FT /id="PRO_0000408738"
FT DOMAIN 3..68
FT /note="CSD"
SQ SEQUENCE 69 AA; 7402 MW; 2A644A4C96F4B425 CRC64;
MAKIKGQVKW FNESKGFGFI TPADGSKDVF VHFSAIQGNG FKTLAEGQNV EFEIQDGQKG
PAAVNVTAI