CSPD_VIBCH
ID CSPD_VIBCH Reviewed; 76 AA.
AC Q9KSW4;
DT 23-JAN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Cold shock-like protein CspD;
GN Name=cspD; OrderedLocusNames=VC_1142;
OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=243277;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 39315 / El Tor Inaba N16961;
RX PubMed=10952301; DOI=10.1038/35020000;
RA Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L.,
RA Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R.,
RA Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D.,
RA Vamathevan J.J., Bass S., Qin H., Dragoi I., Sellers P., McDonald L.A.,
RA Utterback T.R., Fleischmann R.D., Nierman W.C., White O., Salzberg S.L.,
RA Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M.;
RT "DNA sequence of both chromosomes of the cholera pathogen Vibrio
RT cholerae.";
RL Nature 406:477-483(2000).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
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DR EMBL; AE003852; AAF94301.1; -; Genomic_DNA.
DR PIR; C82236; C82236.
DR RefSeq; NP_230787.1; NC_002505.1.
DR AlphaFoldDB; Q9KSW4; -.
DR SMR; Q9KSW4; -.
DR STRING; 243277.VC_1142; -.
DR DNASU; 2614575; -.
DR EnsemblBacteria; AAF94301; AAF94301; VC_1142.
DR KEGG; vch:VC_1142; -.
DR PATRIC; fig|243277.26.peg.1091; -.
DR eggNOG; COG1278; Bacteria.
DR HOGENOM; CLU_117621_0_2_6; -.
DR OMA; HYSTIKM; -.
DR BioCyc; VCHO:VC1142-MON; -.
DR Proteomes; UP000000584; Chromosome 1.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IBA:GO_Central.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR012156; Cold_shock_CspA.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012751; CspD.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR Pfam; PF00313; CSD; 1.
DR PIRSF; PIRSF002599; Cold_shock_A; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR02381; cspD; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 3: Inferred from homology;
KW Activator; Cytoplasm; DNA-binding; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..76
FT /note="Cold shock-like protein CspD"
FT /id="PRO_0000100341"
FT DOMAIN 7..67
FT /note="CSD"
SQ SEQUENCE 76 AA; 8328 MW; BD62347600B94645 CRC64;
MYSMATGTVK WFNNAKGFGF ICPEGEDGDI FAHYSTIQMD GYRTLKAGQQ VSYQVEQGPK
GYHASCVVPI EGQSAK