CSPJ_SALTY
ID CSPJ_SALTY Reviewed; 70 AA.
AC P0CL01; P39818; Q9R766;
DT 08-MAR-2011, integrated into UniProtKB/Swiss-Prot.
DT 08-MAR-2011, sequence version 1.
DT 03-AUG-2022, entry version 55.
DE RecName: Full=Cold shock-like protein CspJ;
GN Name=cspJ; Synonyms=cspB, cspG; OrderedLocusNames=STM1996;
OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Salmonella.
OX NCBI_TaxID=99287;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LT2 / SGSC1412 / ATCC 700720;
RX PubMed=11677609; DOI=10.1038/35101614;
RA McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P.,
RA Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D.,
RA Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E.,
RA Ryan E., Sun H., Florea L., Miller W., Stoneking T., Nhan M., Waterston R.,
RA Wilson R.K.;
RT "Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.";
RL Nature 413:852-856(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-40.
RC STRAIN=LT2;
RX PubMed=2144275; DOI=10.1128/jb.172.9.4964-4978.1990;
RA Smith C.M., Koch W.H., Franklin S.B., Foster P.L., Cebula T.A.,
RA Eisenstadt E.;
RT "Sequence analysis and mapping of the Salmonella typhimurium LT2 umuDC
RT operon.";
RL J. Bacteriol. 172:4964-4978(1990).
RN [3]
RP IDENTIFICATION.
RX PubMed=7920643; DOI=10.1038/ng0694-205;
RA Robison K., Gilbert W., Church G.M.;
RT "Large scale bacterial gene discovery by similarity search.";
RL Nat. Genet. 7:205-214(1994).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
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DR EMBL; AE006468; AAL20906.1; -; Genomic_DNA.
DR EMBL; M57431; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; NP_460947.1; NC_003197.2.
DR RefSeq; WP_000208509.1; NC_003197.2.
DR AlphaFoldDB; P0CL01; -.
DR SMR; P0CL01; -.
DR STRING; 90371.CY43_10500; -.
DR PaxDb; P0CL01; -.
DR EnsemblBacteria; AAL20906; AAL20906; STM1996.
DR GeneID; 1253517; -.
DR KEGG; stm:STM1996; -.
DR PATRIC; fig|99287.12.peg.2113; -.
DR HOGENOM; CLU_117621_2_1_6; -.
DR OMA; DGQKVQF; -.
DR PhylomeDB; P0CL01; -.
DR BioCyc; SENT99287:STM1996-MON; -.
DR Proteomes; UP000001014; Chromosome.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0001072; F:transcription antitermination factor activity, RNA binding; IBA:GO_Central.
DR GO; GO:0060567; P:negative regulation of DNA-templated transcription, termination; IBA:GO_Central.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR012156; Cold_shock_CspA.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR Pfam; PF00313; CSD; 1.
DR PIRSF; PIRSF002599; Cold_shock_A; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 3: Inferred from homology;
KW Activator; Cytoplasm; DNA-binding; Reference proteome; Stress response;
KW Transcription; Transcription regulation.
FT CHAIN 1..70
FT /note="Cold shock-like protein CspJ"
FT /id="PRO_0000100275"
FT DOMAIN 7..67
FT /note="CSD"
SQ SEQUENCE 70 AA; 7745 MW; 29FF68C8A27834F0 CRC64;
MTTKITGLVK WFNPEKGFGF ITPKDGSKDV FVHFSAIQSN EFRTLNENQE VEFSVEQGPK
GPSAVNVVAL
