CSPL3_SORBI
ID CSPL3_SORBI Reviewed; 220 AA.
AC C5WNF5;
DT 27-JUL-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-SEP-2009, sequence version 1.
DT 25-MAY-2022, entry version 54.
DE RecName: Full=CASP-like protein 4B1;
DE Short=SbCASPL4B1;
GN OrderedLocusNames=Sb01g038100;
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623;
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M.,
RA Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24920445; DOI=10.1104/pp.114.239137;
RA Roppolo D., Boeckmann B., Pfister A., Boutet E., Rubio M.C.,
RA Denervaud-Tendon V., Vermeer J.E., Gheyselinck J., Xenarios I., Geldner N.;
RT "Functional and evolutionary analysis of the CASPARIAN STRIP MEMBRANE
RT DOMAIN PROTEIN family.";
RL Plant Physiol. 165:1709-1722(2014).
CC -!- SUBUNIT: Homodimer and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Casparian strip membrane proteins (CASP)
CC family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000760; EER95012.1; -; Genomic_DNA.
DR RefSeq; XP_002468014.1; XM_002467969.1.
DR AlphaFoldDB; C5WNF5; -.
DR EnsemblPlants; OQU92750; OQU92750; SORBI_3001G402701.
DR GeneID; 8084021; -.
DR Gramene; OQU92750; OQU92750; SORBI_3001G402701.
DR KEGG; sbi:8084021; -.
DR eggNOG; ENOG502RYC3; Eukaryota.
DR HOGENOM; CLU_048961_4_1_1; -.
DR InParanoid; C5WNF5; -.
DR OrthoDB; 1388840at2759; -.
DR Proteomes; UP000000768; Chromosome 1.
DR ExpressionAtlas; C5WNF5; baseline.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IBA:GO_Central.
DR InterPro; IPR006702; CASP_dom.
DR Pfam; PF04535; DUF588; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..220
FT /note="CASP-like protein 4B1"
FT /id="PRO_0000412062"
FT TOPO_DOM 1..74
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 75..95
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 96..109
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 110..127
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 128..152
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 153..173
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 174..188
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 189..209
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 210..220
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT REGION 13..56
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 184
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 220 AA; 23203 MW; 850D61964952E647 CRC64;
MAMVTTEAAA AATTAATAAA EKPQDVEKPD YAPYNGASTT ADGGTGARAR RGDGGGGVVD
SVVARWRRED MLDKSPLALH AAAAIFAFVA LVLVASNQHG DWMQFDRYQE YRYLLAIASL
ALLYSLAQAA RHAHRMRGGV DPVSSASARL LDFVGDQVVA YLLMSALSAA VPITNRMRSA
VVNNFTDATA AAISMAFFSF VALALSAVVS GYKLSKQTYM