CSPL7_SORBI
ID CSPL7_SORBI Reviewed; 461 AA.
AC C5XEK4;
DT 09-FEB-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-SEP-2009, sequence version 1.
DT 25-MAY-2022, entry version 53.
DE RecName: Full=CASP-like protein 4U1;
DE Short=SbCASPL4U1;
GN OrderedLocusNames=Sb03g029220;
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623;
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M.,
RA Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24920445; DOI=10.1104/pp.114.239137;
RA Roppolo D., Boeckmann B., Pfister A., Boutet E., Rubio M.C.,
RA Denervaud-Tendon V., Vermeer J.E., Gheyselinck J., Xenarios I., Geldner N.;
RT "Functional and evolutionary analysis of the CASPARIAN STRIP MEMBRANE
RT DOMAIN PROTEIN family.";
RL Plant Physiol. 165:1709-1722(2014).
CC -!- SUBUNIT: Homodimer and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Casparian strip membrane proteins (CASP)
CC family. {ECO:0000305}.
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DR EMBL; CM000762; EES03337.1; -; Genomic_DNA.
DR RefSeq; XP_002458217.1; XM_002458172.1.
DR AlphaFoldDB; C5XEK4; -.
DR STRING; 4558.Sb03g029220.1; -.
DR EnsemblPlants; EES03337; EES03337; SORBI_3003G234800.
DR GeneID; 8058222; -.
DR Gramene; EES03337; EES03337; SORBI_3003G234800.
DR KEGG; sbi:8058222; -.
DR eggNOG; ENOG502QW75; Eukaryota.
DR HOGENOM; CLU_046935_0_0_1; -.
DR InParanoid; C5XEK4; -.
DR OMA; AGDYYAH; -.
DR OrthoDB; 1407654at2759; -.
DR Proteomes; UP000000768; Chromosome 3.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR006702; CASP_dom.
DR Pfam; PF04535; DUF588; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..461
FT /note="CASP-like protein 4U1"
FT /id="PRO_0000391518"
FT TOPO_DOM 1..314
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 315..335
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 336..354
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 355..375
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 376..392
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 393..413
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 414..431
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 432..452
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 453..461
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT REGION 1..239
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..72
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 162..192
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 193..207
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 208..239
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 461 AA; 48381 MW; 62361F3D01E19F8C CRC64;
MASTPRTPAP VRSPPPVPTP THPTPPPPPL ETPQPPLPVS TPPPALETPP PRRVRTPPPP
LETPPPPSPS SSQPGDEYHT PAPSLADGSP REEEASFPSD GREGGGAPAP PKSPQLSPMR
LAAPRLLLPP PSPRTPTGQN GQEEQEGGAK AAAAGAGTGT GTAAPARQQL RLTGLARSPS
SQRSLATTNS SPSPSPSPTP PSPLTPAAAP VVNNNSNNKN NRSGQSTPKR AAETKLPLSS
PAATATIAVQ HFNPVEEAVT SPLHLGIGKA QRLDHHQHQH QQRQEQHAAA AAVENGGSVP
PDVAAAVAVG ERRELSVTLR LATAVLSLAA FSVIASARTS GWAGDYYAHH LQYRYAVAVN
VIVCAYSIAQ SFGEIRRLIS PRFIFRSMSS YYCSLFLDQA LAYLLMSASS AAASRNDLWV
SRFGTDAFNR KITSALWLSF IAFLMLALNA LISTANLFSM L