CSPL8_SORBI
ID CSPL8_SORBI Reviewed; 452 AA.
AC C5XTX2;
DT 09-FEB-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-SEP-2009, sequence version 1.
DT 25-MAY-2022, entry version 55.
DE RecName: Full=CASP-like protein 4A1;
DE Short=SbCASPL4A1;
GN OrderedLocusNames=Sb04g002820;
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623;
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M.,
RA Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24920445; DOI=10.1104/pp.114.239137;
RA Roppolo D., Boeckmann B., Pfister A., Boutet E., Rubio M.C.,
RA Denervaud-Tendon V., Vermeer J.E., Gheyselinck J., Xenarios I., Geldner N.;
RT "Functional and evolutionary analysis of the CASPARIAN STRIP MEMBRANE
RT DOMAIN PROTEIN family.";
RL Plant Physiol. 165:1709-1722(2014).
CC -!- SUBUNIT: Homodimer and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Casparian strip membrane proteins (CASP)
CC family. {ECO:0000305}.
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DR EMBL; CM000763; EES06244.1; -; Genomic_DNA.
DR RefSeq; XP_002453268.1; XM_002453223.1.
DR AlphaFoldDB; C5XTX2; -.
DR STRING; 4558.Sb04g002820.1; -.
DR EnsemblPlants; EES06244; EES06244; SORBI_3004G032500.
DR GeneID; 8057526; -.
DR Gramene; EES06244; EES06244; SORBI_3004G032500.
DR KEGG; sbi:8057526; -.
DR eggNOG; ENOG502QW75; Eukaryota.
DR HOGENOM; CLU_048961_1_0_1; -.
DR InParanoid; C5XTX2; -.
DR OMA; SHTADPN; -.
DR OrthoDB; 1502083at2759; -.
DR Proteomes; UP000000768; Chromosome 4.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR006702; CASP_dom.
DR Pfam; PF04535; DUF588; 1.
PE 3: Inferred from homology;
KW Cell membrane; Glycoprotein; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..452
FT /note="CASP-like protein 4A1"
FT /id="PRO_0000391522"
FT TOPO_DOM 1..305
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 306..326
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 327..347
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 348..368
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 369..389
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 390..406
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 407..423
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 424..444
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 445..452
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 71..147
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 164..283
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..25
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 98..122
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 207..274
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 339
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 423
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 452 AA; 48348 MW; ECF93E41AF8A7C2F CRC64;
MGLRDSLKER EDRRSSEEEG DARQSWMTRE STTGWRKEST AALGTPVADW QCVLLLQFGA
LQQKLLKAFP RAGPRPTTTL VPARPERARK KPHSQPPPST HMALQAQATA SPSPSPSPTR
GRTGSGEWPD DAEKLPIAAT ASPARSSDAV ELVVVASTRH AAAAKYVPRR STSHTADPNP
GRGGGGGSAG WYSWNGGRTR TAAPPRHARA DPPPAPPRRQ QPVEAPPPPP PPPPPPAPAP
ALPPPVPPSP PAPAQAPVPP SATAPAPAPV PAPRASSPHV QFRSADQVVP NILSRKRRAA
AMQRTALLAR GAAAGLCLAA LAVLAADTRK GWARDSYSNY TQFRYSEAVN VIGFIYSVFQ
FVALVELMRR NKHLIPHPKR DLFDFTMDQV LTYLLISSSS SATARVSDLI DNWGSDPFPS
MANGSIAISF LAFAVFAICS LISAYNLFRR DV