CSPLF_ARALL
ID CSPLF_ARALL Reviewed; 164 AA.
AC D7M2M8;
DT 27-JUL-2011, integrated into UniProtKB/Swiss-Prot.
DT 10-AUG-2010, sequence version 1.
DT 03-AUG-2022, entry version 31.
DE RecName: Full=CASP-like protein 1C1;
DE Short=AlCASPL1C1;
GN ORFNames=ARALYDRAFT_327471;
OS Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=81972;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. MN47;
RX PubMed=21478890; DOI=10.1038/ng.807;
RA Hu T.T., Pattyn P., Bakker E.G., Cao J., Cheng J.-F., Clark R.M.,
RA Fahlgren N., Fawcett J.A., Grimwood J., Gundlach H., Haberer G.,
RA Hollister J.D., Ossowski S., Ottilar R.P., Salamov A.A., Schneeberger K.,
RA Spannagl M., Wang X., Yang L., Nasrallah M.E., Bergelson J.,
RA Carrington J.C., Gaut B.S., Schmutz J., Mayer K.F.X., Van de Peer Y.,
RA Grigoriev I.V., Nordborg M., Weigel D., Guo Y.-L.;
RT "The Arabidopsis lyrata genome sequence and the basis of rapid genome size
RT change.";
RL Nat. Genet. 43:476-481(2011).
RN [2]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24920445; DOI=10.1104/pp.114.239137;
RA Roppolo D., Boeckmann B., Pfister A., Boutet E., Rubio M.C.,
RA Denervaud-Tendon V., Vermeer J.E., Gheyselinck J., Xenarios I., Geldner N.;
RT "Functional and evolutionary analysis of the CASPARIAN STRIP MEMBRANE
RT DOMAIN PROTEIN family.";
RL Plant Physiol. 165:1709-1722(2014).
CC -!- SUBUNIT: Homodimer and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Casparian strip membrane proteins (CASP)
CC family. {ECO:0000305}.
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DR EMBL; GL348718; EFH51121.1; -; Genomic_DNA.
DR RefSeq; XP_002874862.1; XM_002874816.1.
DR AlphaFoldDB; D7M2M8; -.
DR SMR; D7M2M8; -.
DR STRING; 81972.D7M2M8; -.
DR EnsemblPlants; fgenesh1_pm.C_scaffold_6002691; fgenesh1_pm.C_scaffold_6002691; fgenesh1_pm.C_scaffold_6002691.
DR GeneID; 9308839; -.
DR Gramene; fgenesh1_pm.C_scaffold_6002691; fgenesh1_pm.C_scaffold_6002691; fgenesh1_pm.C_scaffold_6002691.
DR KEGG; aly:9308839; -.
DR eggNOG; ENOG502RZXX; Eukaryota.
DR HOGENOM; CLU_066104_3_0_1; -.
DR OrthoDB; 1523444at2759; -.
DR Proteomes; UP000008694; Unassembled WGS sequence.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR006459; CASP/CASPL.
DR InterPro; IPR006702; CASP_dom.
DR Pfam; PF04535; DUF588; 1.
DR TIGRFAMs; TIGR01569; A_tha_TIGR01569; 1.
PE 3: Inferred from homology;
KW Cell membrane; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..164
FT /note="CASP-like protein 1C1"
FT /id="PRO_0000412014"
FT TOPO_DOM 1..7
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 8..28
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 29..51
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 52..72
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 73..80
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 81..101
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 102..129
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 130..150
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 151..164
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 164 AA; 17706 MW; C05BFE21F1091014 CRC64;
MVKLTKRIGG LVLRLAAFGA ALAALIVMIT SRERASFFAV SLEAKYTDMA AFKYFVIANA
VVSVYSFLVL FLPKESLLWK FVVVLDLVMT MLLTSSLSAA LAVAQVGKKG NANAGWLPIC
GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHSVVDPFL LQKS