CSPLY_ARATH
ID CSPLY_ARATH Reviewed; 297 AA.
AC Q501G6; Q9FM13;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 07-JUN-2005, sequence version 1.
DT 25-MAY-2022, entry version 84.
DE RecName: Full=CASP-like protein 4A2;
DE Short=AtCASPL4A2;
GN OrderedLocusNames=At5g62820; ORFNames=MQB2.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT features of the regions of 1,456,315 bp covered by nineteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:41-54(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Cheuk R.F., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24920445; DOI=10.1104/pp.114.239137;
RA Roppolo D., Boeckmann B., Pfister A., Boutet E., Rubio M.C.,
RA Denervaud-Tendon V., Vermeer J.E., Gheyselinck J., Xenarios I., Geldner N.;
RT "Functional and evolutionary analysis of the CASPARIAN STRIP MEMBRANE
RT DOMAIN PROTEIN family.";
RL Plant Physiol. 165:1709-1722(2014).
CC -!- SUBUNIT: Homodimer and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Casparian strip membrane proteins (CASP)
CC family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB10851.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB009053; BAB10851.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED97661.1; -; Genomic_DNA.
DR EMBL; BT022001; AAY25413.1; -; mRNA.
DR EMBL; BT023479; AAY57318.1; -; mRNA.
DR RefSeq; NP_201088.1; NM_125677.4.
DR AlphaFoldDB; Q501G6; -.
DR STRING; 3702.AT5G62820.1; -.
DR iPTMnet; Q501G6; -.
DR PaxDb; Q501G6; -.
DR PRIDE; Q501G6; -.
DR ProteomicsDB; 222691; -.
DR EnsemblPlants; AT5G62820.1; AT5G62820.1; AT5G62820.
DR GeneID; 836403; -.
DR Gramene; AT5G62820.1; AT5G62820.1; AT5G62820.
DR KEGG; ath:AT5G62820; -.
DR Araport; AT5G62820; -.
DR TAIR; locus:2170703; AT5G62820.
DR eggNOG; ENOG502QW75; Eukaryota.
DR HOGENOM; CLU_048961_2_0_1; -.
DR InParanoid; Q501G6; -.
DR OMA; PFKIENP; -.
DR OrthoDB; 1502083at2759; -.
DR PhylomeDB; Q501G6; -.
DR PRO; PR:Q501G6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q501G6; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IBA:GO_Central.
DR InterPro; IPR006702; CASP_dom.
DR Pfam; PF04535; DUF588; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..297
FT /note="CASP-like protein 4A2"
FT /id="PRO_0000308689"
FT TOPO_DOM 1..149
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 150..170
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 171..191
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 192..212
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 213..225
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 226..246
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 247..265
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 266..286
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 287..297
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT REGION 1..135
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..24
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 68..85
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 89..135
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 297 AA; 32612 MW; 9109D4AF07009400 CRC64;
MKMKRTASSN SEAQSYNESP HSPLRFHSPL SDAGDLPESR YVSPEGSPFK IENPKSIVAG
NKLTQFSPLP SPIPPPPPQF PPPRRQRNAR VPMNSSSDKS PSSMVVHNSW VREDGGQTTT
RKAGAPINGE ESTRTTVNRA RGDDLVSLTA LGFRITEVIL CVISFSIMAA DKTQGWSGDS
YDRYKEYRYC LAVNVIAFVY SAFEACDAAC YIAKESYMIN CGFHDLFVFS MDQLLAYLLM
SASSCAATRV DDWVSNWGKD EFTQMATASI AVSFLAFGAF AVSALISSYR LFTHASS