CSRA_YERE8
ID CSRA_YERE8 Reviewed; 61 AA.
AC A1JK11;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 25-MAY-2022, entry version 76.
DE RecName: Full=Translational regulator CsrA {ECO:0000255|HAMAP-Rule:MF_00167};
DE AltName: Full=Carbon storage regulator {ECO:0000255|HAMAP-Rule:MF_00167};
DE AltName: Full=Post-transcriptional regulator RsmA {ECO:0000303|PubMed:16359708};
GN Name=csrA {ECO:0000255|HAMAP-Rule:MF_00167};
GN Synonyms=rsmA {ECO:0000303|PubMed:16359708}; OrderedLocusNames=YE0835;
OS Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 /
OS 8081).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=393305;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCTC 13174 / 8081;
RX PubMed=17173484; DOI=10.1371/journal.pgen.0020206;
RA Thomson N.R., Howard S., Wren B.W., Holden M.T.G., Crossman L.,
RA Challis G.L., Churcher C., Mungall K., Brooks K., Chillingworth T.,
RA Feltwell T., Abdellah Z., Hauser H., Jagels K., Maddison M., Moule S.,
RA Sanders M., Whitehead S., Quail M.A., Dougan G., Parkhill J.,
RA Prentice M.B.;
RT "The complete genome sequence and comparative genome analysis of the high
RT pathogenicity Yersinia enterocolitica strain 8081.";
RL PLoS Genet. 2:2039-2051(2006).
RN [2]
RP X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS).
RC STRAIN=NCTC 13174 / 8081;
RX PubMed=16359708; DOI=10.1016/j.jmb.2005.11.045;
RA Heeb S., Kuehne S.A., Bycroft M., Crivii S., Allen M.D., Haas D.,
RA Camara M., Williams P.;
RT "Functional analysis of the post-transcriptional regulator RsmA reveals a
RT novel RNA-binding site.";
RL J. Mol. Biol. 355:1026-1036(2006).
CC -!- FUNCTION: A key translational regulator that binds mRNA to regulate
CC translation initiation and/or mRNA stability. Mediates global changes
CC in gene expression, shifting from rapid growth to stress survival by
CC linking envelope stress, the stringent response and the catabolite
CC repression systems. Usually binds in the 5'-UTR; binding at or near the
CC Shine-Dalgarno sequence prevents ribosome-binding, repressing
CC translation, binding elsewhere in the 5'-UTR can activate translation
CC and/or stabilize the mRNA. Its function is antagonized by small RNA(s).
CC {ECO:0000255|HAMAP-Rule:MF_00167}.
CC -!- SUBUNIT: Homodimer; the beta-strands of each monomer intercalate to
CC form a hydrophobic core while the alpha-helices form wings that extend
CC away from the core (PubMed:16359708). {ECO:0000255|HAMAP-Rule:MF_00167,
CC ECO:0000269|PubMed:16359708}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00167}.
CC -!- SIMILARITY: Belongs to the CsrA/RsmA family. {ECO:0000255|HAMAP-
CC Rule:MF_00167}.
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DR EMBL; AM286415; CAL10935.1; -; Genomic_DNA.
DR RefSeq; WP_002209449.1; NC_008800.1.
DR RefSeq; YP_001005173.1; NC_008800.1.
DR PDB; 2BTI; X-ray; 2.00 A; A/B=1-61.
DR PDBsum; 2BTI; -.
DR AlphaFoldDB; A1JK11; -.
DR SMR; A1JK11; -.
DR STRING; 393305.YE0835; -.
DR EnsemblBacteria; CAL10935; CAL10935; YE0835.
DR GeneID; 7959308; -.
DR KEGG; yen:YE0835; -.
DR PATRIC; fig|393305.7.peg.929; -.
DR eggNOG; COG1551; Bacteria.
DR HOGENOM; CLU_164837_2_1_6; -.
DR OMA; IHRKEVY; -.
DR PRO; PR:A1JK11; -.
DR Proteomes; UP000000642; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0048027; F:mRNA 5'-UTR binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006402; P:mRNA catabolic process; IEA:InterPro.
DR GO; GO:0045947; P:negative regulation of translational initiation; IEA:UniProtKB-UniRule.
DR GO; GO:0045948; P:positive regulation of translational initiation; IEA:UniProtKB-UniRule.
DR GO; GO:0006109; P:regulation of carbohydrate metabolic process; IEA:UniProtKB-UniRule.
DR Gene3D; 2.60.40.4380; -; 1.
DR HAMAP; MF_00167; CsrA; 1.
DR InterPro; IPR003751; CsrA.
DR InterPro; IPR036107; CsrA_sf.
DR PANTHER; PTHR34984; PTHR34984; 1.
DR Pfam; PF02599; CsrA; 1.
DR SUPFAM; SSF117130; SSF117130; 1.
DR TIGRFAMs; TIGR00202; csrA; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Activator; Cytoplasm; Repressor; RNA-binding;
KW Translation regulation.
FT CHAIN 1..61
FT /note="Translational regulator CsrA"
FT /id="PRO_1000023442"
FT STRAND 1..7
FT /evidence="ECO:0007829|PDB:2BTI"
FT STRAND 11..14
FT /evidence="ECO:0007829|PDB:2BTI"
FT TURN 15..17
FT /evidence="ECO:0007829|PDB:2BTI"
FT STRAND 18..26
FT /evidence="ECO:0007829|PDB:2BTI"
FT STRAND 29..36
FT /evidence="ECO:0007829|PDB:2BTI"
FT STRAND 42..44
FT /evidence="ECO:0007829|PDB:2BTI"
FT HELIX 45..55
FT /evidence="ECO:0007829|PDB:2BTI"
SQ SEQUENCE 61 AA; 6853 MW; 16349BD4C2670E1C CRC64;
MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQAEKSQPTT
Y