CT085_MOUSE
ID CT085_MOUSE Reviewed; 136 AA.
AC Q9DA42; Q80YT4;
DT 10-JAN-2003, integrated into UniProtKB/Swiss-Prot.
DT 03-OCT-2012, sequence version 2.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Uncharacterized protein C20orf85 homolog;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=C57BL/6J; TISSUE=Testis;
RX PubMed=16141072; DOI=10.1126/science.1112014;
RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT "The transcriptional landscape of the mammalian genome.";
RL Science 309:1559-1563(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C57BL/6J;
RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X.,
RA Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y.,
RA Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S.,
RA Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R.,
RA Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K.,
RA Eichler E.E., Ponting C.P.;
RT "Lineage-specific biology revealed by a finished genome assembly of the
RT mouse.";
RL PLoS Biol. 7:E1000112-E1000112(2009).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
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DR EMBL; AK006200; BAB24455.1; -; mRNA.
DR EMBL; AL807384; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC050790; AAH50790.1; -; mRNA.
DR CCDS; CCDS50814.1; -.
DR RefSeq; NP_082434.1; NM_028158.1.
DR AlphaFoldDB; Q9DA42; -.
DR SMR; Q9DA42; -.
DR BioGRID; 215228; 1.
DR STRING; 10090.ENSMUSP00000029023; -.
DR PhosphoSitePlus; Q9DA42; -.
DR PaxDb; Q9DA42; -.
DR PRIDE; Q9DA42; -.
DR Antibodypedia; 70475; 12 antibodies from 5 providers.
DR Ensembl; ENSMUST00000029023; ENSMUSP00000029023; ENSMUSG00000027518.
DR GeneID; 72221; -.
DR KEGG; mmu:72221; -.
DR UCSC; uc008odt.2; mouse.
DR MGI; MGI:1919471; 1700021F07Rik.
DR VEuPathDB; HostDB:ENSMUSG00000027518; -.
DR eggNOG; ENOG502S4TU; Eukaryota.
DR GeneTree; ENSGT00940000154459; -.
DR HOGENOM; CLU_125517_0_0_1; -.
DR InParanoid; Q9DA42; -.
DR OMA; WPEQGIH; -.
DR OrthoDB; 1412686at2759; -.
DR PhylomeDB; Q9DA42; -.
DR TreeFam; TF329228; -.
DR BioGRID-ORCS; 72221; 0 hits in 71 CRISPR screens.
DR PRO; PR:Q9DA42; -.
DR Proteomes; UP000000589; Chromosome 2.
DR RNAct; Q9DA42; protein.
DR Bgee; ENSMUSG00000027518; Expressed in seminiferous tubule of testis and 15 other tissues.
DR Genevisible; Q9DA42; MM.
DR InterPro; IPR020339; Uncharacterised_C20orf85.
DR Pfam; PF14945; LLC1; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..136
FT /note="Uncharacterized protein C20orf85 homolog"
FT /id="PRO_0000079449"
FT CONFLICT 6..7
FT /note="LS -> IN (in Ref. 1; BAB24455)"
FT /evidence="ECO:0000305"
FT CONFLICT 12
FT /note="E -> K (in Ref. 1; BAB24455)"
FT /evidence="ECO:0000305"
FT CONFLICT 16
FT /note="L -> F (in Ref. 1; BAB24455)"
FT /evidence="ECO:0000305"
FT CONFLICT 19
FT /note="Q -> L (in Ref. 1; BAB24455)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 136 AA; 15588 MW; 9F1E87B1B784B4C3 CRC64;
MAQKPLSTTA AERMNLVAQD EIWKYRLRAE SEARQNWPAK WGYLTTSMKE LLEGEEEPQT
PKPKPELPSH FYVRPVSPMD KHIKILPSPP VPKTTQGFIG WRSGKPALYC LEKYSEVCSC
KGAYARELCW PEQGVH
