CWC27_XENLA
ID CWC27_XENLA Reviewed; 477 AA.
AC Q6GLX7;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Spliceosome-associated protein CWC27 homolog {ECO:0000305};
DE AltName: Full=Probable inactive peptidyl-prolyl cis-trans isomerase CWC27 homolog {ECO:0000250|UniProtKB:Q6UX04};
DE Short=PPIase CWC27 {ECO:0000250|UniProtKB:Q6UX04};
GN Name=cwc27; Synonyms=sdccag10;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: As part of the spliceosome, plays a role in pre-mRNA
CC splicing. Probable inactive PPIase with no peptidyl-prolyl cis-trans
CC isomerase activity. {ECO:0000250|UniProtKB:Q6UX04}.
CC -!- SUBUNIT: Part of the activated spliceosome B/catalytic step 1
CC spliceosome, one of the forms of the spliceosome which has a well-
CC formed active site but still cannot catalyze the branching reaction and
CC is composed at least of 52 proteins, the U2, U5 and U6 snRNAs and the
CC pre-mRNA. Recruited during early steps of activated spliceosome B
CC maturation, it is probably one of the first proteins released from this
CC complex as he matures to the spliceosome C complex.
CC {ECO:0000250|UniProtKB:Q6UX04}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q6UX04}.
CC -!- SIMILARITY: Belongs to the cyclophilin-type PPIase family.
CC {ECO:0000305}.
CC -!- CAUTION: Despite the fact that it belongs to the cyclophilin-type
CC PPIase family, it has probably no peptidyl-prolyl cis-trans isomerase
CC activity. {ECO:0000250|UniProtKB:Q6UX04}.
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DR EMBL; BC074317; AAH74317.1; -; mRNA.
DR RefSeq; NP_001086199.1; NM_001092730.1.
DR AlphaFoldDB; Q6GLX7; -.
DR SMR; Q6GLX7; -.
DR DNASU; 444628; -.
DR GeneID; 444628; -.
DR KEGG; xla:444628; -.
DR CTD; 444628; -.
DR Xenbase; XB-GENE-942799; cwc27.S.
DR OrthoDB; 1392223at2759; -.
DR Proteomes; UP000186698; Chromosome 1S.
DR Bgee; 444628; Expressed in pancreas and 19 other tissues.
DR GO; GO:0071005; C:U2-type precatalytic spliceosome; ISS:UniProtKB.
DR GO; GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:InterPro.
DR GO; GO:0006457; P:protein folding; IEA:InterPro.
DR GO; GO:0000413; P:protein peptidyl-prolyl isomerization; IEA:InterPro.
DR Gene3D; 2.40.100.10; -; 1.
DR InterPro; IPR029000; Cyclophilin-like_dom_sf.
DR InterPro; IPR020892; Cyclophilin-type_PPIase_CS.
DR InterPro; IPR002130; Cyclophilin-type_PPIase_dom.
DR InterPro; IPR044666; Cyclophilin_A-like.
DR PANTHER; PTHR45625; PTHR45625; 1.
DR Pfam; PF00160; Pro_isomerase; 1.
DR PRINTS; PR00153; CSAPPISMRASE.
DR SUPFAM; SSF50891; SSF50891; 1.
DR PROSITE; PS00170; CSA_PPIASE_1; 1.
DR PROSITE; PS50072; CSA_PPIASE_2; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Nucleus; Phosphoprotein; Reference proteome.
FT CHAIN 1..477
FT /note="Spliceosome-associated protein CWC27 homolog"
FT /id="PRO_0000313653"
FT DOMAIN 11..166
FT /note="PPIase cyclophilin-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00156"
FT REGION 203..355
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 401..477
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 308..381
FT /evidence="ECO:0000255"
FT COMPBIAS 218..258
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 259..278
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 279..351
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 419..477
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 477 AA; 54875 MW; AD5032026CE472D2 CRC64;
MSNIYIQEPP SNGKVLLKTT AGEIDIELWS KEAPKACRNF VQLCLEGYYD NTIFHRVVPE
FIIQGGDPTG TGTGGESVFG KPFRDEFHSR LRFNRRGLVA MANAGPHDNG SQFFFTLGRA
DELNNKHTIF GKVTGDTIYN ILRLAEVDIG EDERPVNPHK IKCTEVLFNP FDDIIPRIDK
KTKKDEEEEG KKSKAKGTKN FNLLSFGEEA EEDEEEVNEV SKVMRGKSKS SHDLLKDDPR
LSSVPAVERE KDSQSADSDK DEDEMSDDDD EEEDDEMDSD EKHQMKDRIS NKLRKDPSKS
IKQAENSDEA EERKSSRSEE LRREARQLKR ELKAAKEKKE NNIKESETAK EAENTVANSA
LEEYLKEKEK YEEVRKKNTN KGVSREQQTL ALLDRFKSKL TQAITEPPKE EEASDVDEEN
DKGWLSHVLQ FEEKSGKVKD ANMQDEDTFE IYDPRNPVNK RRREESKKIM KQKKERR