CX6BL_ARATH
ID CX6BL_ARATH Reviewed; 134 AA.
AC Q9LPJ2; F4IEB8;
DT 21-SEP-2011, integrated into UniProtKB/Swiss-Prot.
DT 21-SEP-2011, sequence version 2.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=Putative cytochrome c oxidase subunit 6b-like;
GN OrderedLocusNames=At1g32710; ORFNames=F6N18.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: This protein is one of the nuclear-coded polypeptide chains
CC of cytochrome c oxidase, the terminal oxidase in mitochondrial electron
CC transport. This protein may be one of the heme-binding subunits of the
CC oxidase (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the cytochrome c oxidase subunit 6B (TC 3.D.4.8)
CC family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF25969.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC017118; AAF25969.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE31520.1; -; Genomic_DNA.
DR RefSeq; NP_174548.1; NM_103005.1.
DR AlphaFoldDB; Q9LPJ2; -.
DR SMR; Q9LPJ2; -.
DR STRING; 3702.AT1G32710.1; -.
DR PaxDb; Q9LPJ2; -.
DR PRIDE; Q9LPJ2; -.
DR ProteomicsDB; 220431; -.
DR EnsemblPlants; AT1G32710.1; AT1G32710.1; AT1G32710.
DR GeneID; 840165; -.
DR Gramene; AT1G32710.1; AT1G32710.1; AT1G32710.
DR KEGG; ath:AT1G32710; -.
DR Araport; AT1G32710; -.
DR TAIR; locus:2035624; AT1G32710.
DR eggNOG; KOG3057; Eukaryota.
DR HOGENOM; CLU_139387_0_0_1; -.
DR InParanoid; Q9LPJ2; -.
DR OMA; MDPHDKM; -.
DR OrthoDB; 1586678at2759; -.
DR PRO; PR:Q9LPJ2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LPJ2; baseline and differential.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:0045277; C:respiratory chain complex IV; IEA:InterPro.
DR CDD; cd00926; Cyt_c_Oxidase_VIb; 1.
DR Gene3D; 1.10.10.140; -; 1.
DR InterPro; IPR003213; Cyt_c_oxidase_su6B.
DR InterPro; IPR036549; Cyt_c_oxidase_su6B_sf.
DR Pfam; PF02297; COX6B; 1.
DR SUPFAM; SSF47694; SSF47694; 1.
DR PROSITE; PS51808; CHCH; 1.
PE 3: Inferred from homology;
KW Disulfide bond; Mitochondrion; Reference proteome.
FT CHAIN 1..134
FT /note="Putative cytochrome c oxidase subunit 6b-like"
FT /id="PRO_0000412236"
FT DOMAIN 71..114
FT /note="CHCH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01150"
FT REGION 1..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 74..84
FT /note="Cx9C motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01150"
FT MOTIF 95..106
FT /note="Cx10C motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01150"
FT COMPBIAS 45..61
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT DISULFID 74..106
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01150"
FT DISULFID 84..95
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01150"
SQ SEQUENCE 134 AA; 15480 MW; F247E9FAAE548674 CRC64;
MSSAQMDPHD KMRSRDISKV ARGQQAPRPA HTPGTVSPPP ENEATFRAKR GDSGRETDAA
VEERFPVTNE TRHCFNRFMQ YHKCIEKNGR DANDCNNLRD YVRSICPEEL VSKIWLKSGR
NKESQGHYQR QYED
