CXB6_BOVIN
ID CXB6_BOVIN Reviewed; 261 AA.
AC Q5E9Z5; Q08E41;
DT 11-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 15-MAR-2005, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Gap junction beta-6 protein;
GN Name=GJB6;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=16305752; DOI=10.1186/1471-2164-6-166;
RA Harhay G.P., Sonstegard T.S., Keele J.W., Heaton M.P., Clawson M.L.,
RA Snelling W.M., Wiedmann R.T., Van Tassell C.P., Smith T.P.L.;
RT "Characterization of 954 bovine full-CDS cDNA sequences.";
RL BMC Genomics 6:166-166(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Hereford; TISSUE=Thalamus;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One gap junction consists of a cluster of closely packed
CC pairs of transmembrane channels, the connexons, through which materials
CC of low MW diffuse from one cell to a neighboring cell. {ECO:0000250}.
CC -!- SUBUNIT: A connexon is composed of a hexamer of connexins. Interacts
CC with CNST (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}. Cell junction, gap junction {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the connexin family. Beta-type (group I)
CC subfamily. {ECO:0000305}.
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DR EMBL; BT020774; AAX08791.1; -; mRNA.
DR EMBL; BC123433; AAI23434.1; -; mRNA.
DR RefSeq; NP_001015546.1; NM_001015546.1.
DR RefSeq; NP_001153649.1; NM_001160177.1.
DR RefSeq; XP_005213824.1; XM_005213767.3.
DR RefSeq; XP_005213825.1; XM_005213768.3.
DR RefSeq; XP_005213826.1; XM_005213769.3.
DR AlphaFoldDB; Q5E9Z5; -.
DR SMR; Q5E9Z5; -.
DR STRING; 9913.ENSBTAP00000052852; -.
DR PaxDb; Q5E9Z5; -.
DR PRIDE; Q5E9Z5; -.
DR Ensembl; ENSBTAT00000052057; ENSBTAP00000052852; ENSBTAG00000038662.
DR GeneID; 508454; -.
DR KEGG; bta:508454; -.
DR CTD; 10804; -.
DR VEuPathDB; HostDB:ENSBTAG00000038662; -.
DR VGNC; VGNC:29381; GJB6.
DR eggNOG; ENOG502QWM8; Eukaryota.
DR GeneTree; ENSGT01030000234513; -.
DR HOGENOM; CLU_037388_4_1_1; -.
DR InParanoid; Q5E9Z5; -.
DR OMA; PNHAIKE; -.
DR OrthoDB; 1043502at2759; -.
DR TreeFam; TF329606; -.
DR Proteomes; UP000009136; Chromosome 12.
DR Bgee; ENSBTAG00000038662; Expressed in surface of tongue and 73 other tissues.
DR ExpressionAtlas; Q5E9Z5; baseline and differential.
DR GO; GO:0005884; C:actin filament; IEA:Ensembl.
DR GO; GO:0005922; C:connexin complex; IEA:InterPro.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0051015; F:actin filament binding; IEA:Ensembl.
DR GO; GO:0048487; F:beta-tubulin binding; IEA:Ensembl.
DR GO; GO:0005243; F:gap junction channel activity; IBA:GO_Central.
DR GO; GO:1903763; F:gap junction channel activity involved in cell communication by electrical coupling; IEA:Ensembl.
DR GO; GO:0008017; F:microtubule binding; IEA:Ensembl.
DR GO; GO:0007267; P:cell-cell signaling; IBA:GO_Central.
DR GO; GO:0042471; P:ear morphogenesis; IEA:Ensembl.
DR GO; GO:0016264; P:gap junction assembly; IEA:Ensembl.
DR GO; GO:1990349; P:gap junction-mediated intercellular transport; IEA:Ensembl.
DR GO; GO:0007605; P:sensory perception of sound; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1440.80; -; 1.
DR InterPro; IPR000500; Connexin.
DR InterPro; IPR019570; Connexin_CCC.
DR InterPro; IPR017990; Connexin_CS.
DR InterPro; IPR013092; Connexin_N.
DR InterPro; IPR038359; Connexin_N_sf.
DR PANTHER; PTHR11984; PTHR11984; 1.
DR Pfam; PF00029; Connexin; 1.
DR PRINTS; PR00206; CONNEXIN.
DR SMART; SM00037; CNX; 1.
DR SMART; SM01089; Connexin_CCC; 1.
DR PROSITE; PS00407; CONNEXINS_1; 1.
DR PROSITE; PS00408; CONNEXINS_2; 1.
PE 2: Evidence at transcript level;
KW Cell junction; Cell membrane; Gap junction; Hearing; Membrane;
KW Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..261
FT /note="Gap junction beta-6 protein"
FT /id="PRO_0000244878"
FT TOPO_DOM 1..22
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 23..45
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 46..75
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 76..98
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 99..131
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 132..154
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 155..192
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 193..215
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 216..261
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 261 AA; 30229 MW; 3FAC8D34508348AB CRC64;
MDWGTLHTFV GGVNKHSTSI GKVWVTVLFV FRVMILVVAA QEVWGDEQED FVCNTLQPGC
RNVCYDHFFP VSHIRLWALQ LIFVSTPALL VAMHVAYYRH EAARRFRRGE TRSEFKDLED
IKRQKVRIEG SLWWTYTSSI FFRIVFEAAF MYVFYFLYNG YHLPWVLKCG IQPCPNLVDC
FISRPTEKTV FTIFMISASV ICMLLNVAEL CYLLLKVCFR RSKRAQTQKA PPNHALKESK
QNEMNELISE GGQNAITGFP S